myRT

myRT report for GCA_000520995.1_of_Aquimarina_macrocephali

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Seq: JACA01000057.1 (53238 bp)
Overview 1 RT 1: 27296-36238 bp 2 RT 2: 44022-49525 bp Neighborhood of RT #1 [27296, 36270] DKNYY DKNYY RVT-GII GIIM RVT-GII Cadherin_repeat Cadherin_repeat Cadherin_repeat LRR_4 LRR_4 LRR_4 PorP_SprF Neighborhood of RT #2 [44022, 49525] TPR TPR_12 TPR_12 PRK11107 PRK15347 zf-ISL3 RVT-GII RAYT Feature: gene Location: 27296-27442 bp Feature: gene Location: 28169-29413 bp Feature: domain Description: DKNYY Location: 28493-28910 bp Feature: domain Description: DKNYY Location: 28493-2891 0 bp Feature: domain Description: DKNYY Location: 28970-29069 bp Feature: domain Description: DKNYY Location: 28970-29069 bp Feature: gene Location: 29485-30558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29503-30088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29503-30088 bp Feature: domain Description: GIIM Note: maturase Location: 30160-30373 bp Feature: domain Description: GIIM Note: maturase Location: 301 60-30373 bp Feature: gene Location: 32050-32190 bp Feature: gene Location: 32421-32603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32424-32601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32424-32601 bp Feature: gene Location: 32924-34618 bp Feature: domain Description: Cadherin_repeat Location: 33035-33302 bp Feature: domain Description: Cadherin_repeat Location: 33035-33302 bp Feature: domain Description: Cadherin_repeat Location: 33326-33593 bp Feature: domain Description: Cadherin_repeat Location: 33326-33593 bp Feature: domain Description: Cadherin_repeat Location: 33617-33914 bp Feature: domain Description: Cadherin_repeat Location: 3361 7-3391 4 bp Feature: domain Description: LRR_4 Location: 34058-34136 bp Feature: domain Description: LRR_4 Location: 34058-341 36 bp Feature: domain Description: LRR_4 Location: 34151-34271 bp Feature: domain Description: LRR_4 Location: 341 51 -34271 bp Feature: domain Description: LRR_4 Location: 34283-34388 bp Feature: domain Description: LRR_4 Location: 34283-34388 bp Feature: gene Location: 35344-36270 bp Feature: domain Description: PorP_SprF Location: 35410-36238 bp Feature: domain Description: PorP_SprF Location: 3541 0-36238 bp Feature: gene Location: 44022-46214 bp Feature: domain Description: TPR Location: 44238-44304 bp Feature: domain Description: TPR Location: 44238-44304 bp Feature: domain Description: TPR_12 Location: 44364-44565 bp Feature: domain Description: TPR_1 2 Location: 44364-44565 bp Feature: domain Description: TPR_12 Location: 44604-44703 bp Feature: domain Description: TPR_1 2 Location: 44604-44703 bp Feature: domain Description: PRK11107 Location: 45051-45837 bp Feature: domain Description: PRK1 1 1 07 Location: 45051 -45837 bp Feature: domain Description: PRK15347 Location: 45867-46188 bp Feature: domain Description: PRK1 5347 Location: 45867-461 88 bp Feature: gene Location: 46247-46558 bp Feature: domain Description: zf-ISL3 Location: 46361-46487 bp Feature: domain Description: zf-ISL3 Location: 46361 -46487 bp Feature: gene Location: 47312-47803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47315-47654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4731 5-47654 bp Feature: gene Location: 48048-48290 bp Feature: domain Description: RAYT Location: 48063-48288 bp Feature: domain Description: RAYT Location: 48063-48288 bp Feature: gene Location: 49364-49525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DKNYY (pfam13644), RVT-GII, GIIM (pfam08388), Cadherin_repeat (cd11304), LRR_4 (pfam12799), PorP_SprF (pfam11751), TPR (smart00028), TPR_12 (pfam13424), PRK11107 (hybrid sensory histidine kinase BarA; Provisional), PRK15347 (two component system sensor kinase)
zf-ISL3 (pfam14690), RAYT (COG1943)

Seq: JACA01000074.1 (17306 bp)
Overview 1 RT 1: 12322-17274 bp Neighborhood of RT #1 [12322, 17274] bacterial_SERPIN bacterial_SERPIN RVT-UG2 Feature: gene Location: 12322-14460 bp Feature: domain Description: bacterial_SERPIN Location: 12331-12640 bp Feature: domain Description: bacterial_SERPIN Location: 12 331-12 640 bp Feature: domain Description: bacterial_SERPIN Location: 12694-13324 bp Feature: domain Description: bacterial_SERPIN Location: 12 694-1332 4 bp Feature: gene Location: 14691-14888 bp Feature: gene Location: 15003-16538 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 15237-16164 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 152 37-16164 bp Feature: gene Location: 16668-16913 bp Feature: gene Location: 16885-17274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bacterial_SERPIN, RVT-UG2