myRT

myRT report for GCA_000521175.1_Aflos454contigs199p

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Seq: KI928193.1 (1857322 bp)
Overview 1 RT 1: 1-4294 bp 2 RT 2: 382520-386668 bp Neighborhood of RT #1 [1, 4308] InsQ RVT_N RVT-GII McrA Y1_Tnp IbpA Neighborhood of RT #2 [382520, 386685] XisH XisI TPR RVT-Retrons HicB XisH Feature: gene Location: 1-663 bp Feature: domain Description: InsQ Location: 10-664 bp Feature: domain Description: InsQ Location: 1 0-664 bp Feature: gene Location: 799-2373 bp Feature: domain Description: RVT_N Location: 835-1081 bp Feature: domain Description: RVT_N Location: 835-1 081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1132-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 32-1 789 bp Feature: domain Description: McrA Location: 2020-2344 bp Feature: domain Description: McrA Location: 2020-2344 bp Feature: gene Location: 3029-3442 bp Feature: domain Description: Y1_Tnp Location: 3065-3425 bp Feature: domain Description: Y1 _Tnp Location: 3065-3425 bp Feature: gene Location: 3841-4308 bp Feature: domain Description: IbpA Location: 3874-4294 bp Feature: domain Description: IbpA Location: 3874-4294 bp Feature: gene Location: 382520-382936 bp Feature: domain Description: XisH Location: 382523-382922 bp Feature: domain Description: XisH Location: 382523-382922 bp Feature: gene Location: 382924-383253 bp Feature: domain Description: XisI Location: 382939-383245 bp Feature: domain Description: XisI Location: 382939-383245 bp Feature: gene Location: 383493-385193 bp Feature: domain Description: TPR Location: 383517-383691 bp Feature: domain Description: TPR Location: 38351 7-383691 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 384087-384708 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 384087-384708 bp Feature: gene Location: 385973-386194 bp Feature: domain Description: HicB Location: 385976-386156 bp Feature: domain Description: HicB Location: 385976-3861 56 bp Feature: gene Location: 386266-386685 bp Feature: domain Description: XisH Location: 386269-386668 bp Feature: domain Description: XisH Location: 386269-386668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: KI928192.1 (2605121 bp)
Overview 1 RT 1: 83263-90527 bp 2 RT 2: 987727-992672 bp 3 RT 3: 2456164-2461833 bp Neighborhood of RT #1 [83263, 90547] RadC PRK07429 RVT_N RVT-GII STKc_PknB_like YfmG Neighborhood of RT #2 [987727, 992672] ParM_like MviM RVT_N RVT-GII GIIM McrA Neighborhood of RT #3 [2456164, 2461976] YfmG Avd_like RVT-DGRs YfmG CopG_antitoxin Feature: gene Location: 83263-83994 bp Feature: domain Description: RadC Location: 83281-83965 bp Feature: domain Description: RadC Location: 832 81-83965 bp Feature: gene Location: 84345-85283 bp Feature: domain Description: PRK07429 Location: 84348-85278 bp Feature: domain Description: PRK0742 9 Location: 84348-852 78 bp Feature: gene Location: 86666-87181 bp Feature: domain Description: RVT_N Location: 86702-86942 bp Feature: domain Description: RVT_N Location: 86702 -86942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86999-87098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86999-87098 bp Feature: gene Location: 88088-88318 bp Feature: gene Location: 88742-90547 bp Feature: domain Description: STKc_PknB_like Location: 88784-89612 bp Feature: domain Description: STKc_PknB_like Location: 88784-89612 bp Feature: domain Description: YfmG Location: 89792-90527 bp Feature: domain Description: YfmG Location: 89792 -9052 7 bp Feature: gene Location: 987727-988923 bp Feature: domain Description: ParM_like Location: 987901-988876 bp Feature: domain Description: ParM_like Location: 987901-988876 bp Feature: gene Location: 989207-990289 bp Feature: domain Description: MviM Location: 989270-990227 bp Feature: domain Description: MviM Location: 9892 70-9902 2 7 bp Feature: gene Location: 990458-992032 bp Feature: domain Description: RVT_N Location: 990494-990740 bp Feature: domain Description: RVT_N Location: 990494-990740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990791-991448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990791-991448 bp Feature: domain Description: GIIM Note: maturase Location: 991505-991694 bp Feature: domain Description: GIIM Note: maturase Location: 991505-991694 bp Feature: domain Description: McrA Location: 991703-992003 bp Feature: domain Description: McrA Location: 991703-992 003 bp Feature: gene Location: 992278-992481 bp Feature: gene Location: 992538-992672 bp Feature: gene Location: 2456164-2459016 bp Feature: domain Description: YfmG Location: 2458204-2458996 bp Feature: domain Description: YfmG Location: 2 4582 04-2 458996 bp Feature: gene Location: 2459279-2459629 bp Feature: domain Description: Avd_like Location: 2459297-2459603 bp Feature: domain Description: Avd_like Location: 2 4592 97-2 459603 bp Feature: gene Location: 2459626-2460705 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2459836-2460475 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 459836-2 460475 bp Feature: gene Location: 2460818-2461054 bp Feature: domain Description: YfmG Location: 2460824-2460929 bp Feature: domain Description: YfmG Location: 2 46082 4-2 46092 9 bp Feature: gene Location: 2461683-2461976 bp Feature: domain Description: CopG_antitoxin Location: 2461692-2461833 bp Feature: domain Description: CopG_antitoxin Location: 2 461692 -2 461833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AZYY01000246.1 (2180 bp)
Overview 1 RT 1: 87-2167 bp Neighborhood of RT #1 [87, 2167] RVT_N RVT-GII McrA Feature: gene Location: 87-1631 bp Feature: domain Description: RVT_N Location: 123-369 bp Feature: domain Description: RVT_N Location: 123 -3 69 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1047 bp Feature: domain Description: McrA Location: 1287-1602 bp Feature: domain Description: McrA Location: 1287-1602 bp Feature: gene Location: 1979-2167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: KI928194.1 (1235933 bp)
Overview 1 RT 1: 430291-433390 bp 2 RT 2: 931428-936647 bp Neighborhood of RT #1 [430291, 433470] Uma2 RVT_N RVT-GII GIIM McrA InsQ Neighborhood of RT #2 [931428, 936647] 3a0901s06TIC22 PRK09328 RVT-DGRs PRK13034 Feature: gene Location: 430291-430623 bp Feature: domain Description: Uma2 Location: 430300-430615 bp Feature: domain Description: Uma2 Location: 4 30300-4 30615 bp Feature: gene Location: 430637-430780 bp Feature: gene Location: 430813-432525 bp Feature: domain Description: RVT_N Location: 430846-431092 bp Feature: domain Description: RVT_N Location: 4 3084 6-4 31092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431134-431815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 31134 -4 31815 bp Feature: domain Description: GIIM Note: maturase Location: 431917-432148 bp Feature: domain Description: GIIM Note: maturase Location: 4 31917-4 3214 8 bp Feature: domain Description: McrA Location: 432193-432487 bp Feature: domain Description: McrA Location: 4 32193-4 324 87 bp Feature: gene Location: 432635-432790 bp Feature: gene Location: 433027-433470 bp Feature: domain Description: InsQ Location: 433033-433390 bp Feature: domain Description: InsQ Location: 4 33033-4 33390 bp Feature: gene Location: 931428-932201 bp Feature: domain Description: 3a0901s06TIC22 Location: 931431-932181 bp Feature: domain Description: 3a0901s06TIC22 Location: 9314 31-932181 bp Feature: gene Location: 932224-933129 bp Feature: domain Description: PRK09328 Location: 932269-933112 bp Feature: domain Description: PRK09328 Location: 932269-933112 bp Feature: gene Location: 933380-934114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 933392-933878 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 933392-933878 bp Feature: gene Location: 934280-935563 bp Feature: domain Description: PRK13034 Location: 934292-935528 bp Feature: domain Description: PRK13034 Location: 934 292-935528 bp Feature: gene Location: 936450-936647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AZYY01000266.1 (672 bp)
Overview 1 RT 1: 15-642 bp Neighborhood of RT #1 [15, 668] RVT-GII McrA Feature: gene Location: 15-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-84 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-84 bp Feature: domain Description: McrA Location: 315-642 bp Feature: domain Description: McrA Location: 315 -642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: AZYY01000245.1 (2208 bp)
Overview 1 RT 1: 1-2098 bp Neighborhood of RT #1 [1, 2127] RVT_N RVT-GII McrA Feature: gene Location: 1-204 bp Feature: gene Location: 553-2127 bp Feature: domain Description: RVT_N Location: 589-835 bp Feature: domain Description: RVT_N Location: 589-835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886 -1543 bp Feature: domain Description: McrA Location: 1777-2098 bp Feature: domain Description: McrA Location: 1777-2098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT