myRT

myRT report for GCA_000521905.1_Serr_marc_BIDMC_50_V1

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Seq: KI929261.1 Serratia marcescens BIDMC 50 genomic scaffold adjbJ-supercont1.3, whole genome shotgun sequence (445278 bp)
Overview 1 RT 1: 191928-196541 bp Neighborhood of RT #1 [191928, 196558] PRK09678 RVT-UG17 SLATT_5 PRK09692 Feature: gene Location: 191928-192155 bp Feature: gene Location: 192152-192406 bp Ori: ETX39196.1 Feature: domain Description: PRK09678 Location: 192155-192344 bp Feature: domain Description: PRK09678 Location: 1 921 55-1 92344 bp Feature: gene Location: 193125-194534 bp Ori: ETX39197.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 193362-193974 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 93362-1 93974 bp Feature: gene Location: 194725-195366 bp Ori: ETX39198.1 Feature: domain Description: SLATT_5 Location: 194728-195334 bp Feature: domain Description: SLATT_5 Location: 1 94728-1 95334 bp Feature: gene Location: 195380-196558 bp Ori: ETX39199.1 Feature: domain Description: PRK09692 Location: 195389-196541 bp Feature: domain Description: PRK09692 Location: 1 95389-1 96541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)

Seq: KI929259.1 Serratia marcescens BIDMC 50 genomic scaffold adjbJ-supercont1.1, whole genome shotgun sequence (3698910 bp)
Overview 1 RT 1: 2677353-2680642 bp Neighborhood of RT #1 [2677353, 2680650] CSD RVT-Retrons tail_comp_S Feature: gene Location: 2677353-2678117 bp Feature: gene Location: 2678285-2678509 bp Ori: ETX46192.1 Feature: domain Description: CSD Location: 2678312-2678495 bp Feature: domain Description: CSD Location: 2 678312 -2 678495 bp Feature: gene Location: 2678510-2679682 bp Ori: ETX46193.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2678648-2679224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 678648-2 6792 2 4 bp Feature: gene Location: 2679928-2680086 bp Feature: gene Location: 2680201-2680650 bp Ori: ETX46195.1 Feature: domain Description: tail_comp_S Location: 2680225-2680642 bp Feature: domain Description: tail_comp_S Location: 2 6802 2 5-2 680642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CSD (pfam00313), RVT-Retrons, tail_comp_S (TIGR01635)