myRT

myRT report for GCA_000522165.1_Esch_coli_BIDMC_19B_V2

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Seq: KI929690.1 (1595193 bp)
Overview 1 RT 1: 1133289-1137171 bp Neighborhood of RT #1 [1133289, 1137176] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 1133289-1133747 bp Feature: domain Description: dut Location: 1133295-1133742 bp Feature: domain Description: dut Location: 1 1 33295-1 1 33742 bp Feature: gene Location: 1133854-1134450 bp Feature: domain Description: slmA Location: 1133860-1134436 bp Feature: domain Description: slmA Location: 1 1 33860-1 1 34436 bp Feature: gene Location: 1134496-1135455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1134631-1135180 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 34631 -1 1 351 80 bp Feature: gene Location: 1135753-1136409 bp Feature: domain Description: pyrE Location: 1135771-1136404 bp Feature: domain Description: pyrE Location: 1 1 35771 -1 1 36404 bp Feature: gene Location: 1136460-1137176 bp Feature: domain Description: rph Location: 1136463-1137171 bp Feature: domain Description: rph Location: 1 1 36463-1 1 371 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: KI929689.1 (2961404 bp)
Overview 1 RT 1: 693922-697904 bp Neighborhood of RT #1 [693922, 697930] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 693922-694953 bp Feature: domain Description: Asparaginase_2 Location: 694012-694945 bp Feature: domain Description: Asparaginase_2 Location: 694012 -694945 bp Feature: gene Location: 695280-695429 bp Feature: gene Location: 695477-695923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695783-695885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 695783-695885 bp Feature: gene Location: 696145-696516 bp Feature: gene Location: 696569-697930 bp Feature: domain Description: DcuC Location: 696572-697904 bp Feature: domain Description: DcuC Location: 696572 -697904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)