myRT

myRT report for GCA_000522325.1_Esch_coli_BWH_40_V1

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Seq: KI929782.1 Escherichia coli BWH 40 genomic scaffold adjbS-supercont1.1, whole genome shotgun sequence (5088210 bp)
Overview 1 RT 1: 174879-180198 bp 2 RT 2: 203502-208191 bp 3 RT 3: 826509-832540 bp Neighborhood of RT #1 [174879, 180224] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Neighborhood of RT #2 [203502, 208247] RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [826509, 832677] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 174879-176108 bp Ori: ETY50772.1 Feature: domain Description: YesM Location: 175359-176100 bp Feature: domain Description: YesM Location: 1 75359-1 761 00 bp Feature: gene Location: 176181-176369 bp Feature: gene Location: 176691-177173 bp Ori: ETY50774.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 176700-176940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 76700-1 76940 bp Feature: domain Description: GIIM Note: maturase Location: 176988-177168 bp Feature: domain Description: GIIM Note: maturase Location: 1 76988-1 771 68 bp Feature: gene Location: 177240-177779 bp Ori: ETY50775.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177570-177648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77570-1 77648 bp Feature: gene Location: 178265-179170 bp Feature: gene Location: 179307-180224 bp Ori: ETY50777.1 Feature: domain Description: PFLE_PFLC Location: 179343-180198 bp Feature: domain Description: PFLE_PFLC Location: 1 79343-1 801 98 bp Feature: gene Location: 203502-203825 bp Feature: gene Location: 203873-204697 bp Feature: gene Location: 205706-207229 bp Ori: ETY50805.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205979-206711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205979-20671 1 bp Feature: domain Description: GIIM Note: maturase Location: 206786-206984 bp Feature: domain Description: GIIM Note: maturase Location: 206786-206984 bp Feature: gene Location: 207421-207792 bp Ori: ETY50806.1 Feature: domain Description: PHA02517 Location: 207424-207790 bp Feature: domain Description: PHA0251 7 Location: 207424-207790 bp Feature: gene Location: 207897-208247 bp Ori: ETY50807.1 Feature: domain Description: InsE Location: 207906-208191 bp Feature: domain Description: InsE Location: 207906-2081 91 bp Feature: gene Location: 826509-826649 bp Ori: ETY49683.1 Feature: domain Description: SfsB Location: 826518-826590 bp Feature: domain Description: SfsB Location: 82651 8-826590 bp Feature: gene Location: 826646-827116 bp Feature: gene Location: 827463-830672 bp Ori: ETY49685.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 827991-828480 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 827991 -828480 bp Feature: domain Description: nitrilase Location: 829986-830583 bp Feature: domain Description: nitrilase Location: 829986-830583 bp Feature: gene Location: 830988-831770 bp Ori: ETY49686.1 Feature: domain Description: AbiEi_3_N Location: 831000-831261 bp Feature: domain Description: AbiEi_3_N Location: 831 000-831 261 bp Feature: domain Description: AbiEi_3 Location: 831273-831729 bp Feature: domain Description: AbiEi_3 Location: 831 273-831 729 bp Feature: gene Location: 831757-832677 bp Ori: ETY49687.1 Feature: domain Description: AbiEii Location: 831799-832540 bp Feature: domain Description: AbiEii Location: 831 799-832540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194)
AbiEi_3 (pfam11459), AbiEii (pfam08843)