myRT

myRT report for GCA_000523715.1_ASM52371v1

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Seq: JAOC01000035.1 (140551 bp)
Overview 1 RT 1: 58970-65250 bp 2 RT 2: 78075-82413 bp Neighborhood of RT #1 [58970, 65250] PRK06063 group_II_RT_mat RVT-GII GIIM PHA02517 RVT-GII Transposase_mut Neighborhood of RT #2 [78075, 82413] InsE HTH_21 RVT-GII GIIM Transposase_mut Feature: gene Location: 58970-59611 bp Feature: domain Description: PRK06063 Location: 59060-59489 bp Feature: domain Description: PRK06063 Location: 59060-59489 bp Feature: gene Location: 60439-60945 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 60619-60787 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6061 9-60787 bp Feature: gene Location: 60938-61810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60950-61412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60950-61 41 2 bp Feature: domain Description: GIIM Note: maturase Location: 61505-61718 bp Feature: domain Description: GIIM Note: maturase Location: 61 505-61 71 8 bp Feature: gene Location: 61921-62169 bp Feature: gene Location: 62415-63041 bp Feature: domain Description: PHA02517 Location: 62565-63021 bp Feature: domain Description: PHA0251 7 Location: 62565-63021 bp Feature: gene Location: 63199-64452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63523-64210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63523-6421 0 bp Feature: gene Location: 64644-64898 bp Feature: domain Description: Transposase_mut Location: 64647-64890 bp Feature: domain Description: Transposase_mut Location: 64647-64890 bp Feature: gene Location: 64900-65250 bp Feature: gene Location: 78075-78374 bp Feature: domain Description: InsE Location: 78078-78360 bp Feature: domain Description: InsE Location: 78078-78360 bp Feature: gene Location: 78386-78823 bp Feature: domain Description: HTH_21 Location: 78521-78674 bp Feature: domain Description: HTH_21 Location: 78521 -78674 bp Feature: gene Location: 79444-80835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79705-80392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79705-80392 bp Feature: domain Description: GIIM Note: maturase Location: 80467-80662 bp Feature: domain Description: GIIM Note: maturase Location: 80467-80662 bp Feature: gene Location: 81374-81904 bp Feature: domain Description: Transposase_mut Location: 81377-81746 bp Feature: domain Description: Transposase_mut Location: 81 377-81 746 bp Feature: gene Location: 81964-82413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06063 (DEDDh family exonuclease), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Transposase_mut (pfam00872), InsE (COG2963), HTH_21 (pfam13276)

Seq: JAOC01000008.1 (531025 bp)
Overview 1 RT 1: 360863-364195 bp Neighborhood of RT #1 [360863, 364197] GIIM RVT-GII PIN_MT3492-like PRK07773 Feature: gene Location: 360863-361117 bp Feature: gene Location: 361218-361535 bp Feature: domain Description: GIIM Note: maturase Location: 361221-361422 bp Feature: domain Description: GIIM Note: maturase Location: 3612 2 1-36142 2 bp Feature: gene Location: 361532-362731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362015-362603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 015-362 603 bp Feature: gene Location: 363513-363764 bp Feature: domain Description: PIN_MT3492-like Location: 363549-363723 bp Feature: domain Description: PIN_MT3492 -like Location: 363549-36372 3 bp Feature: gene Location: 363820-364197 bp Feature: domain Description: PRK07773 Location: 363868-364195 bp Feature: domain Description: PRK07773 Location: 363868-364195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, PIN_MT3492-like (cd09874), PRK07773 (replicative DNA helicase; Validated)

Seq: JAOC01000025.1 (398894 bp)
Overview 1 RT 1: 56603-61962 bp Neighborhood of RT #1 [56603, 62177] PBP2_NikA_DppA_OppA_like GIIM RVT-GII PRK00174 PRK00174 Feature: gene Location: 56603-58159 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 56741-57515 bp Feature: domain Description: PBP2_NikA_DppA_OppA_like Location: 56741-57515 bp Feature: gene Location: 58213-58548 bp Feature: domain Description: GIIM Note: maturase Location: 58339-58435 bp Feature: domain Description: GIIM Note: maturase Location: 583 3 9-5843 5 bp Feature: gene Location: 58860-59198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58863-59196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58863 -59196 bp Feature: gene Location: 60092-61201 bp Feature: domain Description: PRK00174 Location: 60206-61163 bp Feature: domain Description: PRK00174 Location: 60206-61163 bp Feature: gene Location: 61245-62177 bp Feature: domain Description: PRK00174 Location: 61251-61962 bp Feature: domain Description: PRK00174 Location: 61251-61962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_NikA_DppA_OppA_like (cl01709), GIIM (pfam08388), RVT-GII, PRK00174 (acetyl-CoA synthetase; Provisional)

Seq: JAOC01000022.1 (177721 bp)
Overview 1 RT 1: 146736-150872 bp Neighborhood of RT #1 [146736, 150883] panB panB RVT-GII GIIM acyl_WS_DGAT Feature: gene Location: 146736-146963 bp Feature: domain Description: panB Location: 146739-146955 bp Feature: domain Description: panB Location: 14 6739-14 6955 bp Feature: gene Location: 146960-147241 bp Feature: domain Description: panB Location: 146963-147158 bp Feature: domain Description: panB Location: 14 6963-14 7158 bp Feature: gene Location: 148013-149080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148364-148952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 8364 -14 8952 bp Feature: gene Location: 149058-149393 bp Feature: domain Description: GIIM Note: maturase Location: 149136-149280 bp Feature: domain Description: GIIM Note: maturase Location: 14 9136-14 9280 bp Feature: gene Location: 149849-150883 bp Feature: domain Description: acyl_WS_DGAT Location: 149852-150872 bp Feature: domain Description: acyl_WS_DGAT Location: 14 9852-150872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT panB (TIGR00222), RVT-GII, GIIM (pfam08388), acyl_WS_DGAT (TIGR02946)

Seq: JAOC01000029.1 (110079 bp)
Overview 1 RT 1: 56339-60324 bp Neighborhood of RT #1 [56339, 60473] HNH_4 PHA02517 RVT-GII GIIM HTH_21 Feature: gene Location: 56339-57376 bp Feature: domain Description: HNH_4 Location: 57071-57197 bp Feature: domain Description: HNH_4 Location: 5 7071-5 7197 bp Feature: gene Location: 57529-57885 bp Feature: domain Description: PHA02517 Location: 57532-57865 bp Feature: domain Description: PHA025 17 Location: 5 75 32-5 7865 bp Feature: gene Location: 58021-59661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58531-59218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 85 31-5 9218 bp Feature: domain Description: GIIM Note: maturase Location: 59293-59488 bp Feature: domain Description: GIIM Note: maturase Location: 5 9293-5 9488 bp Feature: gene Location: 59664-59882 bp Feature: gene Location: 60036-60473 bp Feature: domain Description: HTH_21 Location: 60171-60324 bp Feature: domain Description: HTH_21 Location: 60171-60324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_4 (pfam13395), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276)

Seq: JAOC01000004.1 (1256900 bp)
Overview 1 RT 1: 341687-345212 bp 2 RT 2: 966358-968400 bp 3 RT 3: 1208988-1213553 bp Neighborhood of RT #1 [341687, 345256] LppA PHA02517 RVT-GII GIIM HTH_21 Neighborhood of RT #2 [966358, 968480] RVT-GII GIIM Neighborhood of RT #3 [1208988, 1213561] DDE_Tnp_1_2 rve RVT-GII GIIM PRK07801 PRK07801 PRK07801 Feature: gene Location: 341687-342079 bp Feature: domain Description: LppA Location: 341693-342029 bp Feature: domain Description: LppA Location: 3416 93-342029 bp Feature: gene Location: 342223-342801 bp Feature: domain Description: PHA02517 Location: 342325-342781 bp Feature: domain Description: PHA02517 Location: 342325-342781 bp Feature: gene Location: 342806-344254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343124-343811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343124-343811 bp Feature: domain Description: GIIM Note: maturase Location: 343886-344081 bp Feature: domain Description: GIIM Note: maturase Location: 343886 -344081 bp Feature: gene Location: 344746-344925 bp Feature: gene Location: 344939-345256 bp Feature: domain Description: HTH_21 Location: 345074-345212 bp Feature: domain Description: HTH_21 Location: 345074-345212 bp Feature: gene Location: 966358-966624 bp Feature: gene Location: 966906-967289 bp Feature: gene Location: 967623-968480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967626-968205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 76 26 -96 8205 bp Feature: domain Description: GIIM Note: maturase Location: 968298-968400 bp Feature: domain Description: GIIM Note: maturase Location: 96 8298-96 8400 bp Feature: gene Location: 1208988-1209347 bp Feature: domain Description: DDE_Tnp_1_2 Location: 1209069-1209309 bp Feature: domain Description: DDE_Tnp_1_2 Location: 120906 9-1209309 bp Feature: gene Location: 1209401-1209838 bp Feature: domain Description: rve Location: 1209491-1209728 bp Feature: domain Description: rve Location: 1209491-1209728 bp Feature: gene Location: 1210385-1211365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1210388-1210967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1210388-121096 7 bp Feature: domain Description: GIIM Note: maturase Location: 1211060-1211273 bp Feature: domain Description: GIIM Note: maturase Location: 121106 0-1211273 bp Feature: gene Location: 1212036-1213700 bp Feature: domain Description: PRK07801 Location: 1212039-1212138 bp Feature: domain Description: PRK07801 Location: 1212039-1212138 bp Feature: domain Description: PRK07801 Location: 1212516-1213137 bp Feature: domain Description: PRK07801 Location: 1212516 -1213137 bp Feature: gene Location: 1213214-1213561 bp Feature: domain Description: PRK07801 Location: 1213217-1213553 bp Feature: domain Description: PRK07801 Location: 1213217-1213553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LppA (pfam16708), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276), DDE_Tnp_1_2 (pfam13586), rve (pfam00665), PRK07801 (acetyl-CoA C-acetyltransferase)