myRT

myRT report for GCA_000526555.1_ASM52655v1

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Seq: JAGH01000002.1 (2985711 bp)
Overview 1 RT 1: 1922929-1927933 bp 2 RT 2: 1949556-1957157 bp 3 RT 3: 2728946-2733185 bp Neighborhood of RT #1 [1922929, 1927938] RVT-GII YkfC RVT_N RVT-GII GIIM DUF4134 Neighborhood of RT #2 [1949556, 1957771] LytTR RVT_N RVT-GII GIIM N6_Mtase COG4646 Neighborhood of RT #3 [2728946, 2733185] HptA MFS_DtpA_like RVT-Retrons Feature: gene Location: 1922929-1924074 bp Feature: gene Location: 1924028-1924243 bp Feature: gene Location: 1924275-1925327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1924278-1924896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 924278-1 924896 bp Feature: domain Description: YkfC Location: 1925106-1925199 bp Feature: domain Description: YkfC Location: 1 9251 06-1 9251 99 bp Feature: gene Location: 1925404-1927134 bp Feature: domain Description: RVT_N Location: 1925467-1925710 bp Feature: domain Description: RVT_N Location: 1 925467-1 92571 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1925755-1926421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 925755-1 926421 bp Feature: domain Description: GIIM Note: maturase Location: 1926478-1926712 bp Feature: domain Description: GIIM Note: maturase Location: 1 926478-1 92671 2 bp Feature: gene Location: 1927492-1927638 bp Feature: gene Location: 1927801-1927938 bp Feature: domain Description: DUF4134 Location: 1927825-1927933 bp Feature: domain Description: DUF41 34 Location: 1 927825-1 927933 bp Feature: gene Location: 1949556-1950089 bp Feature: domain Description: LytTR Location: 1949778-1950039 bp Feature: domain Description: LytTR Location: 1 949778-1 950039 bp Feature: gene Location: 1950230-1951456 bp Feature: gene Location: 1951410-1953077 bp Feature: domain Description: RVT_N Location: 1951464-1951707 bp Feature: domain Description: RVT_N Location: 1 951 464-1 951 707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1951752-1952400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 951 752-1 952400 bp Feature: domain Description: GIIM Note: maturase Location: 1952454-1952685 bp Feature: domain Description: GIIM Note: maturase Location: 1 952454-1 952685 bp Feature: gene Location: 1953092-1953373 bp Feature: gene Location: 1953734-1957771 bp Feature: domain Description: N6_Mtase Location: 1954247-1954658 bp Feature: domain Description: N6_Mtase Location: 1 954247-1 954658 bp Feature: domain Description: COG4646 Location: 1955423-1957157 bp Feature: domain Description: COG4646 Location: 1 955423-1 9571 57 bp Feature: gene Location: 2728946-2729482 bp Feature: domain Description: HptA Location: 2728964-2729474 bp Feature: domain Description: HptA Location: 2728964-2729474 bp Feature: gene Location: 2729522-2731120 bp Feature: domain Description: MFS_DtpA_like Location: 2729603-2731091 bp Feature: domain Description: MFS_DtpA_like Location: 2729603-2731 091 bp Feature: gene Location: 2731332-2732453 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2731644-2732196 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2731 644-27321 96 bp Feature: gene Location: 2732648-2732857 bp Feature: gene Location: 2732991-2733185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JAGH01000001.1 (2073316 bp)
Overview 1 RT 1: 64101-69441 bp Neighborhood of RT #1 [64101, 69441] DUF4373 PDDEXK_2 RVT_N RVT-GII GIIM Feature: gene Location: 64101-64997 bp Feature: domain Description: DUF4373 Location: 64119-64371 bp Feature: domain Description: DUF4373 Location: 64119-64371 bp Feature: gene Location: 65307-66215 bp Feature: domain Description: PDDEXK_2 Location: 65394-66066 bp Feature: domain Description: PDDEXK_2 Location: 65394-66066 bp Feature: gene Location: 66271-67920 bp Feature: domain Description: RVT_N Location: 66340-66583 bp Feature: domain Description: RVT_N Location: 66340-66583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66628-67273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6662 8-672 73 bp Feature: domain Description: GIIM Note: maturase Location: 67324-67558 bp Feature: domain Description: GIIM Note: maturase Location: 6732 4-67558 bp Feature: gene Location: 68340-68534 bp Feature: gene Location: 68674-69441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JAGH01000005.1 (1246274 bp)
Overview 1 RT 1: 268851-274128 bp Neighborhood of RT #1 [268851, 274565] rnfA UDP_G4E_1_SDR_e RVT-GII GIIM PRK14609 DUF4373 Feature: gene Location: 268851-269429 bp Feature: domain Description: rnfA Location: 268854-269421 bp Feature: domain Description: rnfA Location: 268854-269421 bp Feature: gene Location: 269581-270615 bp Feature: domain Description: UDP_G4E_1_SDR_e Location: 269593-270586 bp Feature: domain Description: UDP_G4E_1_SDR_e Location: 269593 -270586 bp Feature: gene Location: 271263-272663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271599-272214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271599-272214 bp Feature: domain Description: GIIM Note: maturase Location: 272268-272499 bp Feature: domain Description: GIIM Note: maturase Location: 272268-272499 bp Feature: gene Location: 272867-273694 bp Feature: domain Description: PRK14609 Location: 272870-273674 bp Feature: domain Description: PRK14609 Location: 272870-273 674 bp Feature: gene Location: 273867-274565 bp Feature: domain Description: DUF4373 Location: 273879-274128 bp Feature: domain Description: DUF43 73 Location: 273 879-274128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT