myRT

myRT report for GCA_000529265.1_ISC11v1

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Seq: CBWP010000063.1 (71968 bp)
Overview 1 RT 1: 68365-71887 bp Neighborhood of RT #1 [68365, 71887] Arm-DNA-bind_3 XerC PHA02517 RVT-GII GIIM Feature: gene Location: 68365-69102 bp Feature: domain Description: Arm-DNA-bind_3 Location: 68374-68632 bp Feature: domain Description: Arm-DNA-bind_3 Location: 68374-68632 bp Feature: domain Description: XerC Location: 68671-69100 bp Feature: domain Description: XerC Location: 68671 -691 00 bp Feature: gene Location: 69106-69510 bp Feature: domain Description: PHA02517 Location: 69109-69490 bp Feature: domain Description: PHA0251 7 Location: 691 09-69490 bp Feature: gene Location: 69675-71198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69948-70680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69948-70680 bp Feature: domain Description: GIIM Note: maturase Location: 70755-70953 bp Feature: domain Description: GIIM Note: maturase Location: 70755-70953 bp Feature: gene Location: 71492-71887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), XerC (COG4973), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)

Seq: CBWP010000048.1 (2490 bp)
Overview 1 RT 1: 2-2486 bp Neighborhood of RT #1 [2, 2488] RVT-GII GIIM PHA02517 Feature: gene Location: 2-607 bp Feature: gene Location: 561-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 834-1566 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1839 bp Feature: domain Description: GIIM Note: maturase Location: 1641-1839 bp Feature: gene Location: 2249-2488 bp Feature: domain Description: PHA02517 Location: 2252-2486 bp Feature: domain Description: PHA02 517 Location: 2 2 52 -2 486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CBWP010000071.1 (181641 bp)
Overview 1 RT 1: 88610-92578 bp Neighborhood of RT #1 [88610, 92589] INT_ICEBs1_C_like PHA02517 RVT-GII GIIM InsE PHA02517 Feature: gene Location: 88610-89026 bp Feature: domain Description: INT_ICEBs1_C_like Location: 88703-88916 bp Feature: domain Description: INT_ICEBs1_C_like Location: 88703 -88916 bp Feature: gene Location: 89116-89520 bp Feature: domain Description: PHA02517 Location: 89119-89500 bp Feature: domain Description: PHA02517 Location: 89119-89500 bp Feature: gene Location: 89685-91208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89958-90690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89958-90690 bp Feature: domain Description: GIIM Note: maturase Location: 90765-90963 bp Feature: domain Description: GIIM Note: maturase Location: 90765-90963 bp Feature: gene Location: 91502-91897 bp Feature: gene Location: 91948-92589 bp Feature: domain Description: InsE Location: 92011-92233 bp Feature: domain Description: InsE Location: 92011-9223 3 bp Feature: domain Description: PHA02517 Location: 92335-92578 bp Feature: domain Description: PHA02517 Location: 923 3 5-92578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963)

Seq: CBWP010000054.1 (70024 bp)
Overview 1 RT 1: 56960-63603 bp Neighborhood of RT #1 [56960, 63785] PRK13513 PRK10201 RVT-UG11 5 Feature: gene Location: 56960-58957 bp Feature: domain Description: PRK13513 Location: 56975-58955 bp Feature: domain Description: PRK13513 Location: 56975-58955 bp Feature: gene Location: 58988-59494 bp Feature: domain Description: PRK10201 Location: 58991-59489 bp Feature: domain Description: PRK10201 Location: 58991-594 89 bp Feature: gene Location: 59896-60666 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 60028-60487 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 60028-604 87 bp Feature: gene Location: 61647-61979 bp Feature: gene Location: 62085-63785 bp Feature: domain Description: 5 Location: 63279-63603 bp Feature: domain Description: 5 Location: 63279-63603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13513 (ligand-gated channel protein), PRK10201 (G/U mismatch-specific DNA glycosylase), 5 (PHA02596)

Seq: CBWP010000089.1 (118600 bp)
Overview 1 RT 1: 34952-38545 bp Neighborhood of RT #1 [34952, 38610] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 34952-35386 bp Feature: gene Location: 35399-35803 bp Feature: domain Description: PHA02517 Location: 35402-35783 bp Feature: domain Description: PHA025 17 Location: 35 402-35 783 bp Feature: gene Location: 35968-37491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36241-36973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36241-36973 bp Feature: domain Description: GIIM Note: maturase Location: 37048-37246 bp Feature: domain Description: GIIM Note: maturase Location: 37048-37246 bp Feature: gene Location: 37445-37870 bp Feature: gene Location: 38083-38610 bp Feature: domain Description: PHA02517 Location: 38209-38545 bp Feature: domain Description: PHA025 17 Location: 38209-385 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)