myRT

myRT report for GCA_000529325.1_IS33v1

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Seq: CBWI010000066.1 (33162 bp)
Overview 1 RT 1: 29287-32349 bp Neighborhood of RT #1 [29287, 32366] PRK10724 SmpB RVT-UG11 PRK09678 Feature: gene Location: 29287-29724 bp Feature: domain Description: PRK10724 Location: 29290-29719 bp Feature: domain Description: PRK1 0724 Location: 29290-2971 9 bp Feature: gene Location: 29874-30356 bp Feature: domain Description: SmpB Location: 29904-30348 bp Feature: domain Description: SmpB Location: 29904-30348 bp Feature: gene Location: 30971-31270 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 30974-31085 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 30974-31 085 bp Feature: gene Location: 31713-31901 bp Feature: gene Location: 32148-32366 bp Feature: domain Description: PRK09678 Location: 32151-32349 bp Feature: domain Description: PRK09678 Location: 321 51 -32349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10724 (type II toxin-antitoxin system RatA family toxin), SmpB (pfam01668), RVT-UG11, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: CBWI010000041.1 (38322 bp)
Overview 1 RT 1: 3-2561 bp Neighborhood of RT #1 [3, 2563] RVT-GII PRK10276 umuC Feature: gene Location: 3-797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-405 bp Feature: gene Location: 877-1296 bp Feature: domain Description: PRK10276 Location: 880-1291 bp Feature: domain Description: PRK102 76 Location: 880-12 91 bp Feature: gene Location: 1298-2563 bp Feature: domain Description: umuC Location: 1301-2561 bp Feature: domain Description: umuC Location: 1301-2 561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CBWI010000095.1 (1486 bp)
Overview 1 RT 1: 2-1133 bp Neighborhood of RT #1 [2, 1483] RVT-GII Feature: gene Location: 2-1483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 -113 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CBWI010000210.1 (9748 bp)
Overview 1 RT 1: 8022-9353 bp Neighborhood of RT #1 [8022, 9745] RVT-GII Feature: gene Location: 8022-8192 bp Feature: gene Location: 8526-8756 bp Feature: gene Location: 8990-9745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8999-9353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8999-9353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CBWI010000216.1 (7841 bp)
Overview 1 RT 1: 2-2106 bp Neighborhood of RT #1 [2, 2111] RVT-GII ArdC Feature: gene Location: 2-676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -284 bp Feature: gene Location: 745-1014 bp Feature: gene Location: 1146-2111 bp Feature: domain Description: ArdC Location: 1272-2106 bp Feature: domain Description: ArdC Location: 1272-2106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ArdC (COG4227)

Seq: CBWI010000300.1 (3468 bp)
Overview 1 RT 1: 2-3455 bp Neighborhood of RT #1 [2, 3466] InsE PHA02517 RVT-GII GIIM PHA02517 DEDD_Tnp_IS110 Feature: gene Location: 2-190 bp Feature: domain Description: InsE Location: 8-179 bp Feature: domain Description: InsE Location: 8-179 bp Feature: gene Location: 217-642 bp Feature: domain Description: PHA02517 Location: 241-577 bp Feature: domain Description: PHA02517 Location: 241-577 bp Feature: gene Location: 1234-2757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1507-2239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1507-2239 bp Feature: domain Description: GIIM Note: maturase Location: 2314-2512 bp Feature: domain Description: GIIM Note: maturase Location: 2314-2512 bp Feature: gene Location: 2922-3080 bp Feature: domain Description: PHA02517 Location: 2925-3045 bp Feature: domain Description: PHA02517 Location: 2925-3045 bp Feature: gene Location: 3299-3466 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3338-3455 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3338-3455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548)

Seq: CBWI010000413.1 (15847 bp)
Overview 1 RT 1: 3-2178 bp Neighborhood of RT #1 [3, 2183] RVT-GII RVT-GII PRK10597 Feature: gene Location: 3-458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270-444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 0-444 bp Feature: gene Location: 421-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-958 bp Feature: gene Location: 1410-1619 bp Feature: gene Location: 1935-2183 bp Feature: domain Description: PRK10597 Location: 1938-2178 bp Feature: domain Description: PRK10597 Location: 1938-217 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional)