myRT

myRT report for GCA_000529555.1_ISC41v1

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Seq: CBWR010000067.1 (4988 bp)
Overview 1 RT 1: 451-2682 bp Neighborhood of RT #1 [451, 2717] RVT-GII SR_ResInv Feature: gene Location: 451-660 bp Feature: gene Location: 795-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1062-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 062-1 278 bp Feature: gene Location: 1504-2136 bp Feature: gene Location: 2313-2717 bp Feature: domain Description: SR_ResInv Location: 2361-2682 bp Feature: domain Description: SR_ResInv Location: 2361 -2682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SR_ResInv (cd03768)

Seq: CBWR010000058.1 (83680 bp)
Overview 1 RT 1: 117-2405 bp Neighborhood of RT #1 [117, 2405] RVT-Retrons Feature: gene Location: 117-761 bp Feature: gene Location: 797-1609 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 956-1574 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 956-1574 bp Feature: gene Location: 1682-1858 bp Feature: gene Location: 2166-2405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: CBWR010000061.1 (59727 bp)
Overview 1 RT 1: 5980-9459 bp Neighborhood of RT #1 [5980, 9464] DUF4094 Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 5980-6684 bp Feature: domain Description: DUF4094 Location: 6022-6112 bp Feature: domain Description: DUF4094 Location: 6022-6112 bp Feature: domain Description: Peptidase_S74 Location: 6328-6487 bp Feature: domain Description: Peptidase_S74 Location: 63 28-6487 bp Feature: gene Location: 6695-6982 bp Feature: gene Location: 7090-7839 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7108-7303 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 7108-73 03 bp Feature: gene Location: 8442-8993 bp Feature: domain Description: SLATT_5 Location: 8448-8964 bp Feature: domain Description: SLATT_5 Location: 8448-8964 bp Feature: gene Location: 9216-9464 bp Feature: domain Description: PRK10597 Location: 9219-9459 bp Feature: domain Description: PRK10597 Location: 9219-9459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: CBWR010000033.1 (31593 bp)
Overview 1 RT 1: 15767-19326 bp Neighborhood of RT #1 [15767, 19391] zinc_ribbon_11 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 15767-16267 bp Feature: domain Description: zinc_ribbon_11 Location: 15884-16202 bp Feature: domain Description: zinc_ribbon_11 Location: 15884 -16202 bp Feature: gene Location: 16233-16679 bp Feature: domain Description: PHA02517 Location: 16236-16677 bp Feature: domain Description: PHA02517 Location: 16236-16677 bp Feature: gene Location: 16965-18320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17238-17970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17238-17970 bp Feature: domain Description: GIIM Note: maturase Location: 18045-18243 bp Feature: domain Description: GIIM Note: maturase Location: 1804 5-1824 3 bp Feature: gene Location: 18274-18699 bp Feature: gene Location: 18912-19391 bp Feature: domain Description: PHA02517 Location: 18972-19326 bp Feature: domain Description: PHA02517 Location: 18972-19326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zinc_ribbon_11 (pfam11682), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)