myRT

myRT report for GCA_000529945.1_IS46v1

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Seq: CBWL010000141.1 (16538 bp)
Overview 1 RT 1: 4938-10819 bp Neighborhood of RT #1 [4938, 10836] Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 4938-5231 bp Feature: domain Description: Integrase_1 Location: 4944-5100 bp Feature: domain Description: Integrase_1 Location: 4944-51 00 bp Feature: gene Location: 5346-5582 bp Feature: gene Location: 5593-7467 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6001-6445 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6001 -6445 bp Feature: gene Location: 7467-10076 bp Feature: domain Description: FimD Location: 7524-10065 bp Feature: domain Description: FimD Location: 7524-1 0065 bp Feature: gene Location: 10108-10836 bp Feature: domain Description: FimC Location: 10156-10819 bp Feature: domain Description: FimC Location: 1 01 56-1 081 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: CBWL010000910.1 (37108 bp)
Overview 1 RT 1: 28921-32406 bp Neighborhood of RT #1 [28921, 32447] PRK10597 RVT-GII XerC Feature: gene Location: 28921-29142 bp Feature: gene Location: 29269-29460 bp Feature: domain Description: PRK10597 Location: 29272-29449 bp Feature: domain Description: PRK10597 Location: 2 92 72 -2 9449 bp Feature: gene Location: 29539-31026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29944-30634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9944-30634 bp Feature: gene Location: 31032-31199 bp Feature: gene Location: 32031-32447 bp Feature: domain Description: XerC Location: 32100-32406 bp Feature: domain Description: XerC Location: 32 100-32 406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), RVT-GII, XerC (COG4973)

Seq: CBWL010000904.1 (17779 bp)
Overview 1 RT 1: 14452-17778 bp Neighborhood of RT #1 [14452, 17777] Q RVT-GII PRK10276 umuC Feature: gene Location: 14452-14850 bp Feature: domain Description: Q Location: 14455-14842 bp Feature: domain Description: Q Location: 14455-14842 bp Feature: gene Location: 15137-15349 bp Feature: gene Location: 15424-16833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15751-16441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15751-16441 bp Feature: gene Location: 16912-17331 bp Feature: domain Description: PRK10276 Location: 16915-17326 bp Feature: domain Description: PRK10276 Location: 16915-173 26 bp Feature: gene Location: 17334-17777 bp Feature: domain Description: umuC Location: 17337-17778 bp Feature: domain Description: umuC Location: 173 3 7-17778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CBWL010000251.1 (1075 bp)
Overview 1 RT 1: 2-1054 bp Neighborhood of RT #1 [2, 1074] RVT-GII RVT-GII Feature: gene Location: 2-793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-4 55 bp Feature: gene Location: 835-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CBWL010000431.1 (5819 bp)
Overview 1 RT 1: 1-2122 bp Neighborhood of RT #1 [1, 2235] RVT-GII PRK10276 Feature: gene Location: 1-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 406-1096 bp Feature: gene Location: 1431-1598 bp Feature: gene Location: 1828-2235 bp Feature: domain Description: PRK10276 Location: 1831-2122 bp Feature: domain Description: PRK10276 Location: 1831-2122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)