myRT

myRT report for GCA_000534515.1_Ente_cloa_complex_MGH_37_V1

Download annotations/find similar RTs

Seq: KI973205.1 Enterobacter sp. MGH 37 genomic scaffold adjcm-supercont1.1, whole genome shotgun sequence (2700719 bp)
Overview 1 RT 1: 2461432-2467481 bp Neighborhood of RT #1 [2461432, 2467501] PRK09692 RVT-Retrons Ogr_Delta COG3515 VasL Feature: gene Location: 2461432-2462451 bp Ori: EUM45482.1 Feature: domain Description: PRK09692 Location: 2461441-2462443 bp Feature: domain Description: PRK09692 Location: 2461 441 -2462443 bp Feature: gene Location: 2462454-2463494 bp Feature: gene Location: 2463494-2464678 bp Ori: EUM45484.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2463644-2464223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2463644-2464223 bp Feature: gene Location: 2465468-2465656 bp Ori: EUM45485.1 Feature: domain Description: Ogr_Delta Location: 2465495-2465627 bp Feature: domain Description: Ogr_Delta Location: 2465495-2465627 bp Feature: gene Location: 2466182-2467501 bp Ori: EUM45486.1 Feature: domain Description: COG3515 Location: 2466194-2466722 bp Feature: domain Description: COG351 5 Location: 24661 94-2466722 bp Feature: domain Description: VasL Location: 2467049-2467481 bp Feature: domain Description: VasL Location: 2467049-2467481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606), COG3515 (Predicted component of the type VI protein secretion system ), VasL (pfam12486)

Seq: KI973207.1 Enterobacter sp. MGH 37 genomic scaffold adjcm-supercont1.3, whole genome shotgun sequence (110902 bp)
Overview 1 RT 1: 73134-78616 bp Neighborhood of RT #1 [73134, 78624] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 73134-73805 bp Ori: EUM37284.1 Feature: domain Description: Plasmid_stab_B Location: 73149-73356 bp Feature: domain Description: Plasmid_stab_B Location: 73149-73356 bp Feature: domain Description: Plasmid_stab_B Location: 73461-73668 bp Feature: domain Description: Plasmid_stab_B Location: 73461-73668 bp Feature: gene Location: 73808-74779 bp Ori: EUM37285.1 Feature: domain Description: StbA Location: 73811-74756 bp Feature: domain Description: StbA Location: 73811-74756 bp Feature: gene Location: 75028-76515 bp Ori: EUM37286.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75433-76123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75433-7612 3 bp Feature: gene Location: 76922-77353 bp Ori: EUM37287.1 Feature: domain Description: PRK10276 Location: 76973-77336 bp Feature: domain Description: PRK102 76 Location: 76973-77336 bp Feature: gene Location: 77353-78624 bp Ori: EUM37288.1 Feature: domain Description: umuC Location: 77356-78616 bp Feature: domain Description: umuC Location: 77356-78616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KI973206.1 Enterobacter sp. MGH 37 genomic scaffold adjcm-supercont1.2, whole genome shotgun sequence (2195251 bp)
Overview 1 RT 1: 499163-508424 bp Neighborhood of RT #1 [499163, 508483] RMtype1_S_EcoEI-TRD1-CR1_like RMtype1_S_EcoEI-TRD1-CR1_like HsdM RVT-UG1 RT_Bac_retron_II Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 499163-500539 bp Ori: EUM43660.1 Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 499319-499799 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 4993 19-499799 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 500297-500441 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 500297-500441 bp Feature: gene Location: 500539-502899 bp Ori: EUM43661.1 Feature: domain Description: HsdM Location: 500563-501964 bp Feature: domain Description: HsdM Location: 500563 -501964 bp Feature: gene Location: 503107-506883 bp Ori: EUM43662.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 503725-504232 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 503 725-50423 2 bp Feature: domain Description: RT_Bac_retron_II Location: 506038-506194 bp Feature: domain Description: RT_Bac_retron_II Location: 50603 8-506194 bp Feature: gene Location: 506996-507277 bp Feature: gene Location: 507176-508483 bp Ori: EUM43664.1 Feature: domain Description: Arm-DNA-bind_3 Location: 507191-507458 bp Feature: domain Description: Arm-DNA-bind_3 Location: 507191-507458 bp Feature: domain Description: INT_P4_C Location: 507875-508424 bp Feature: domain Description: INT_P4_C Location: 507875-508424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), HsdM (COG0286), RVT-UG1, RT_Bac_retron_II (cd03487), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)