myRT

myRT report for GCA_000539855.1_Stap_aure_AMMC6013_V1

Download annotations/find similar RTs

Seq: KI975528.1 Staphylococcus aureus AMMC6013 genomic scaffold adppU-supercont1.12, whole genome shotgun sequence (22946 bp)
Overview 1 RT 1: 785-7306 bp Neighborhood of RT #1 [785, 7332] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 785-1273 bp Feature: gene Location: 1353-1961 bp Feature: gene Location: 2501-3091 bp Ori: EVE73356.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2975-3074 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2975-3074 bp Feature: gene Location: 3178-4269 bp Ori: EVE73357.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3181-3361 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 31 81 -3361 bp Feature: gene Location: 4623-5468 bp Ori: EVE73358.1 Feature: domain Description: PenP Location: 4635-5460 bp Feature: domain Description: PenP Location: 4635-5460 bp Feature: gene Location: 5575-7332 bp Ori: EVE73359.1 Feature: domain Description: MecR1 Location: 5578-6607 bp Feature: domain Description: MecR1 Location: 5578-6607 bp Feature: domain Description: Transpeptidase Location: 6661-7306 bp Feature: domain Description: Transpeptidase Location: 6661 -7306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: KI975534.1 Staphylococcus aureus AMMC6013 genomic scaffold adppU-supercont1.2, whole genome shotgun sequence (571975 bp)
Overview 1 RT 1: 45688-51139 bp Neighborhood of RT #1 [45688, 51139] PRK08617 RVT-Retrons Feature: gene Location: 45688-47352 bp Ori: EVE76615.1 Feature: domain Description: PRK08617 Location: 45697-47344 bp Feature: domain Description: PRK08617 Location: 45697-47344 bp Feature: gene Location: 47704-47874 bp Feature: gene Location: 48602-49618 bp Ori: EVE76617.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48752-49289 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48752 -492 89 bp Feature: gene Location: 49863-50492 bp Feature: gene Location: 50492-51139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons