myRT

myRT report for GCA_000540995.1_Stap_aure_SJUD6101_V1

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Seq: KI976788.1 Staphylococcus aureus SJUD6101 genomic scaffold adppO-supercont1.3, whole genome shotgun sequence (326153 bp)
Overview 1 RT 1: 45127-50578 bp Neighborhood of RT #1 [45127, 50578] PRK08617 RVT-Retrons Feature: gene Location: 45127-46791 bp Ori: EVG33053.1 Feature: domain Description: PRK08617 Location: 45136-46783 bp Feature: domain Description: PRK0861 7 Location: 451 36-46783 bp Feature: gene Location: 47143-47313 bp Feature: gene Location: 48041-49057 bp Ori: EVG33055.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48191-48728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 481 91 -48728 bp Feature: gene Location: 49302-49931 bp Feature: gene Location: 49931-50578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: KI976782.1 Staphylococcus aureus SJUD6101 genomic scaffold adppO-supercont1.19, whole genome shotgun sequence (24872 bp)
Overview 1 RT 1: 786-7307 bp Neighborhood of RT #1 [786, 7333] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 786-1274 bp Feature: gene Location: 1354-1962 bp Feature: gene Location: 2502-3092 bp Ori: EVG28257.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2976-3075 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 976-3075 bp Feature: gene Location: 3179-4270 bp Ori: EVG28258.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3182-3362 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3182 -3362 bp Feature: gene Location: 4624-5469 bp Ori: EVG28259.1 Feature: domain Description: PenP Location: 4636-5461 bp Feature: domain Description: PenP Location: 4636-5461 bp Feature: gene Location: 5576-7333 bp Ori: EVG28260.1 Feature: domain Description: MecR1 Location: 5579-6608 bp Feature: domain Description: MecR1 Location: 5579-6608 bp Feature: domain Description: Transpeptidase Location: 6662-7307 bp Feature: domain Description: Transpeptidase Location: 6662 -7307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)