myRT

myRT report for GCA_000541055.1_Stap_aure_SMMC6076_V1

Download annotations/find similar RTs

Seq: KI976836.1 Staphylococcus aureus SMMC6076 genomic scaffold adpqf-supercont1.1, whole genome shotgun sequence (622230 bp)
Overview 1 RT 1: 340650-346101 bp Neighborhood of RT #1 [340650, 346101] PRK08617 RVT-Retrons Feature: gene Location: 340650-342314 bp Ori: EVG43286.1 Feature: domain Description: PRK08617 Location: 340659-342306 bp Feature: domain Description: PRK0861 7 Location: 340659-342306 bp Feature: gene Location: 342666-342836 bp Feature: gene Location: 343564-344580 bp Ori: EVG43288.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 343714-344251 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34371 4-344251 bp Feature: gene Location: 344825-345454 bp Feature: gene Location: 345454-346101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: KI976838.1 Staphylococcus aureus SMMC6076 genomic scaffold adpqf-supercont1.11, whole genome shotgun sequence (26996 bp)
Overview 1 RT 1: 1146-7667 bp Neighborhood of RT #1 [1146, 7693] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 1146-1634 bp Feature: gene Location: 1714-2322 bp Feature: gene Location: 2862-3452 bp Ori: EVG37744.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3336-3435 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3336-3435 bp Feature: gene Location: 3539-4630 bp Ori: EVG37745.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3542-3722 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3542 -372 2 bp Feature: gene Location: 4984-5829 bp Ori: EVG37746.1 Feature: domain Description: PenP Location: 4996-5821 bp Feature: domain Description: PenP Location: 4996-582 1 bp Feature: gene Location: 5936-7693 bp Ori: EVG37747.1 Feature: domain Description: MecR1 Location: 5939-6968 bp Feature: domain Description: MecR1 Location: 5939-6968 bp Feature: domain Description: Transpeptidase Location: 7022-7667 bp Feature: domain Description: Transpeptidase Location: 702 2 -7667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)