myRT

myRT report for GCA_000542415.1_Stap_aure_LAMC6106_V1

Download annotations/find similar RTs

Seq: KI978425.1 Staphylococcus aureus LAMC6106 genomic scaffold adppG-supercont1.14, whole genome shotgun sequence (26618 bp)
Overview 1 RT 1: 797-7319 bp Neighborhood of RT #1 [797, 7345] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 797-1285 bp Feature: gene Location: 1365-1973 bp Feature: gene Location: 2513-3103 bp Ori: EVI49215.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2987-3086 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2987-3086 bp Feature: gene Location: 3190-4281 bp Ori: EVI49216.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3193-3373 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 31 93-3373 bp Feature: gene Location: 4635-5264 bp Ori: EVI49217.1 Feature: domain Description: PenP Location: 4641-5256 bp Feature: domain Description: PenP Location: 4641 -5256 bp Feature: gene Location: 5588-7345 bp Ori: EVI49218.1 Feature: domain Description: MecR1 Location: 5591-6620 bp Feature: domain Description: MecR1 Location: 5591 -6620 bp Feature: domain Description: Transpeptidase Location: 6674-7319 bp Feature: domain Description: Transpeptidase Location: 6674-731 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: KI978439.1 Staphylococcus aureus LAMC6106 genomic scaffold adppG-supercont1.4, whole genome shotgun sequence (329142 bp)
Overview 1 RT 1: 47632-53083 bp Neighborhood of RT #1 [47632, 53083] PRK08617 RVT-Retrons Feature: gene Location: 47632-49296 bp Ori: EVI51500.1 Feature: domain Description: PRK08617 Location: 47641-49288 bp Feature: domain Description: PRK08617 Location: 47641-492 88 bp Feature: gene Location: 49648-49818 bp Feature: gene Location: 50546-51562 bp Ori: EVI51502.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50696-51233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50696-512 33 bp Feature: gene Location: 51807-52436 bp Feature: gene Location: 52436-53083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons