myRT

myRT report for GCA_000559065.1_SJY1

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Seq: AZRT01000015.1 Ochrobactrum rhizosphaerae SJY1 contig015, whole genome shotgun sequence (31880 bp)
Overview 1 RT 1: 119-3842 bp Neighborhood of RT #1 [119, 3842] NAT_SF RVT-UG7 Feature: gene Location: 119-331 bp Feature: gene Location: 364-879 bp Feature: domain Description: NAT_SF Location: 532-742 bp Feature: domain Description: NAT_SF Location: 532-742 bp Feature: gene Location: 1148-2791 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1553-1973 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 553-1 973 bp Feature: gene Location: 2788-3483 bp Feature: gene Location: 3567-3842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NAT_SF (cl17182), RVT-UG7

Seq: AZRT01000030.1 Ochrobactrum rhizosphaerae SJY1 contig030, whole genome shotgun sequence (2563 bp)
Overview 1 RT 1: 33-2423 bp Neighborhood of RT #1 [33, 2542] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 33-383 bp Feature: gene Location: 626-2542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 893-1730 bp Feature: domain Description: Intron_maturas2 Location: 1811-2099 bp Feature: domain Description: Intron_maturas2 Location: 1811-2 099 bp Feature: domain Description: HNHc Note: nucleases Location: 2264-2423 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 64-2 42 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AZRT01000116.1 Ochrobactrum rhizosphaerae SJY1 contig116, whole genome shotgun sequence (20293 bp)
Overview 1 RT 1: 15554-18564 bp Neighborhood of RT #1 [15554, 18566] PHA02517 RVT-GII KOG4768 PHA02517 PHA02517 Feature: gene Location: 15554-15862 bp Feature: domain Description: PHA02517 Location: 15563-15830 bp Feature: domain Description: PHA02517 Location: 15563 -1583 0 bp Feature: gene Location: 16115-16387 bp Feature: gene Location: 16481-18007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16754-17486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16754-17486 bp Feature: domain Description: KOG4768 Location: 17645-17762 bp Feature: domain Description: KOG4768 Location: 17645-17762 bp Feature: gene Location: 17976-18329 bp Feature: domain Description: PHA02517 Location: 18075-18327 bp Feature: domain Description: PHA02517 Location: 18075-183 27 bp Feature: gene Location: 18432-18566 bp Feature: domain Description: PHA02517 Location: 18438-18564 bp Feature: domain Description: PHA02517 Location: 1843 8-18564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )