myRT

myRT report for GCA_000565325.1_saliniS10B

Download annotations/find similar RTs

Seq: AQOE01000180.1 Salinivibrio socompensis S10B contig180, whole genome shotgun sequence (7460 bp)
Overview 1 RT 1: 4545-7016 bp Neighborhood of RT #1 [4545, 7030] COG3636 RVT-Retrons Feature: gene Location: 4545-4901 bp Feature: domain Description: COG3636 Location: 4677-4893 bp Feature: domain Description: COG3636 Location: 4677-4893 bp Feature: gene Location: 5685-6320 bp Feature: gene Location: 6320-7030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6425-7016 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6425-701 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3636 (DNA-binding prophage protein ), RVT-Retrons

Seq: AQOE01000220.1 Salinivibrio socompensis S10B contig220, whole genome shotgun sequence (1919 bp)
Overview 1 RT 1: 3-1849 bp Neighborhood of RT #1 [3, 1860] RVT-Retrons RVT-Retrons Feature: gene Location: 3-644 bp Feature: gene Location: 734-970 bp Feature: gene Location: 1205-1555 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1361-1550 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1361-1550 bp Feature: gene Location: 1591-1860 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1627-1849 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 162 7-1849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: AQOE01000244.1 Salinivibrio socompensis S10B contig244, whole genome shotgun sequence (2179 bp)
Overview 1 RT 1: 659-2177 bp Neighborhood of RT #1 [659, 2177] RVT-GII Feature: gene Location: 659-1918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 932-1664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 2-1664 bp Feature: gene Location: 2052-2177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII