myRT

myRT report for GCA_000565825.1_ASM56582v1

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Seq: AZOW01000130.1 Shigella flexneri Shi06AH130 Shi06AH130_0130, whole genome shotgun sequence (2356 bp)
Overview 1 RT 1: 2-2009 bp Neighborhood of RT #1 [2, 2254] PHA02517 RVT-GII GIIM Feature: gene Location: 2-139 bp Feature: domain Description: PHA02517 Location: 8-74 bp Feature: domain Description: PHA0251 7 Location: 8-74 bp Feature: gene Location: 731-2254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1004-1736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 004-1 736 bp Feature: domain Description: GIIM Note: maturase Location: 1811-2009 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 1 -2009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AZOW01000245.1 Shigella flexneri Shi06AH130 Shi06AH130_0246, whole genome shotgun sequence (1061 bp)
Overview 1 RT 1: 155-950 bp Neighborhood of RT #1 [155, 958] RVT-GII Feature: gene Location: 155-958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AZOW01000359.1 Shigella flexneri Shi06AH130 Shi06AH130_0369, whole genome shotgun sequence (1652 bp)
Overview 1 RT 1: 1-1500 bp Neighborhood of RT #1 [1, 1649] DDE_Tnp_IS66 RVT-GII Feature: gene Location: 1-183 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-157 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-157 bp Feature: gene Location: 744-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII