myRT

myRT report for GCA_000565965.1_ASM56596v1

Download annotations/find similar RTs

Seq: AZPD01000258.1 Shigella flexneri 51575 51575_0258, whole genome shotgun sequence (14800 bp)
Overview 1 RT 1: 1957-4675 bp Neighborhood of RT #1 [1957, 4675] RVT-GII GIIM GIIM Feature: gene Location: 1957-2199 bp Feature: gene Location: 2371-2526 bp Feature: gene Location: 2552-3079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2558-2702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2558-2702 bp Feature: domain Description: GIIM Note: maturase Location: 2786-3002 bp Feature: domain Description: GIIM Note: maturase Location: 2786-3002 bp Feature: gene Location: 3163-3408 bp Feature: domain Description: GIIM Note: maturase Location: 3169-3310 bp Feature: domain Description: GIIM Note: maturase Location: 31 69-331 0 bp Feature: gene Location: 4166-4675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AZPD01000259.1 Shigella flexneri 51575 51575_0259, whole genome shotgun sequence (14070 bp)
Overview 1 RT 1: 6394-9185 bp Neighborhood of RT #1 [6394, 9211] COG3547 RVT-GII DDE_Tnp_IS66 Feature: gene Location: 6394-6879 bp Feature: domain Description: COG3547 Location: 6412-6865 bp Feature: domain Description: COG3547 Location: 6412 -6865 bp Feature: gene Location: 6975-7142 bp Feature: gene Location: 7415-8386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7601-8255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7601-82 55 bp Feature: gene Location: 8474-8611 bp Feature: gene Location: 8864-9211 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8891-9185 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8891-9185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, DDE_Tnp_IS66 (pfam03050)