myRT

myRT report for GCA_000566425.1_ASM56642v1

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Seq: AZQA01000004.1 Shigella flexneri Shi06GS02 Shi06GS02_0004, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AZQA01000129.1 Shigella flexneri Shi06GS02 Shi06GS02_0129, whole genome shotgun sequence (4064 bp)
Overview 1 RT 1: 82-2072 bp Neighborhood of RT #1 [82, 2072] Tra5 RVT-GII GIIM Feature: gene Location: 82-282 bp Feature: domain Description: Tra5 Location: 91-265 bp Feature: domain Description: Tra5 Location: 91-2 65 bp Feature: gene Location: 295-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1090 bp Feature: gene Location: 1151-1477 bp Feature: domain Description: GIIM Note: maturase Location: 1184-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1184-1403 bp Feature: gene Location: 1830-2072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801)

Seq: AZQA01000236.1 Shigella flexneri Shi06GS02 Shi06GS02_0236, whole genome shotgun sequence (1681 bp)
Overview 1 RT 1: 1-1680 bp Neighborhood of RT #1 [1, 1679] DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 1-183 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-157 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-157 bp Feature: gene Location: 744-1679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1500 bp Feature: domain Description: GIIM Note: maturase Location: 1578-1680 bp Feature: domain Description: GIIM Note: maturase Location: 1578-1680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)