myRT

myRT report for GCA_000566445.1_ASM56644v1

Download annotations/find similar RTs

Seq: AZQB01000081.1 Shigella flexneri Shi06HN159 Shi06HN159_0081, whole genome shotgun sequence (2342 bp)
Overview 1 RT 1: 103-2291 bp Neighborhood of RT #1 [103, 2291] RVT-GII GIIM Feature: gene Location: 103-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1 1 08 bp Feature: domain Description: GIIM Note: maturase Location: 1183-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 83-1 381 bp Feature: gene Location: 1920-2291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AZQB01000120.1 Shigella flexneri Shi06HN159 Shi06HN159_0120, whole genome shotgun sequence (1033 bp)
Overview 1 RT 1: 90-885 bp Neighborhood of RT #1 [90, 893] RVT-GII Feature: gene Location: 90-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AZQB01000211.1 Shigella flexneri Shi06HN159 Shi06HN159_0211, whole genome shotgun sequence (1638 bp)
Overview 1 RT 1: 2-1609 bp Neighborhood of RT #1 [2, 1635] RVT-GII DDE_Tnp_IS66 Feature: gene Location: 2-895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104-758 bp Feature: gene Location: 990-1373 bp Feature: gene Location: 1456-1635 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1459-1609 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1459-1609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII