myRT

myRT report for GCA_000566545.1_ASM56654v1

Download annotations/find similar RTs

Seq: AZQG01000039.1 Shigella flexneri 2001025 2001025_0039, whole genome shotgun sequence (1702 bp)
Overview 1 RT 1: 112-1560 bp Neighborhood of RT #1 [112, 1700] DDE_Tnp_IS66 RVT-GII Feature: gene Location: 112-243 bp Feature: domain Description: DDE_Tnp_IS66 Location: 124-217 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 24-21 7 bp Feature: gene Location: 804-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906-1560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 906-1 560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: AZQG01000172.1 Shigella flexneri 2001025 2001025_0172, whole genome shotgun sequence (2398 bp)
Overview 1 RT 1: 56-1999 bp Neighborhood of RT #1 [56, 2244] RVT-GII GIIM Feature: gene Location: 56-427 bp Feature: gene Location: 721-2244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-172 6 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1999 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AZQG01000197.1 Shigella flexneri 2001025 2001025_0197, whole genome shotgun sequence (1041 bp)
Overview 1 RT 1: 94-889 bp Neighborhood of RT #1 [94, 897] RVT-GII Feature: gene Location: 94-897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 94-889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII