myRT

myRT report for GCA_000566625.1_ASM56662v1

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Seq: AZQK01000157.1 Shigella flexneri 2002127 2002127_0157, whole genome shotgun sequence (2350 bp)
Overview 1 RT 1: 2-2003 bp Neighborhood of RT #1 [2, 2248] PHA02517 RVT-GII GIIM Feature: gene Location: 2-133 bp Feature: domain Description: PHA02517 Location: 5-68 bp Feature: domain Description: PHA0251 7 Location: 5-68 bp Feature: gene Location: 725-2248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1 730 bp Feature: domain Description: GIIM Note: maturase Location: 1805-2003 bp Feature: domain Description: GIIM Note: maturase Location: 1 805-2003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AZQK01000158.1 Shigella flexneri 2002127 2002127_0158, whole genome shotgun sequence (1646 bp)
Overview 1 RT 1: 1-1617 bp Neighborhood of RT #1 [1, 1643] RVT-GII DDE_Tnp_IS66 Feature: gene Location: 1-903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103-757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103-757 bp Feature: gene Location: 998-1381 bp Feature: gene Location: 1464-1643 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1467-1617 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1467-1617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: AZQK01000242.1 Shigella flexneri 2002127 2002127_0242, whole genome shotgun sequence (1048 bp)
Overview 1 RT 1: 149-944 bp Neighborhood of RT #1 [149, 952] RVT-GII Feature: gene Location: 149-952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII