myRT

myRT report for GCA_000566725.1_Kleb_pneu_UCI_44_V1

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Seq: KK036549.1 Klebsiella pneumoniae UCI 44 genomic scaffold adjcL-supercont1.1, whole genome shotgun sequence (2868477 bp)
Overview 1 RT 1: 586378-589785 bp 2 RT 2: 1030252-1035857 bp 3 RT 3: 1375453-1380871 bp 4 RT 4: 1550935-1557368 bp Neighborhood of RT #1 [586378, 589886] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030252, 1035883] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1375453, 1380873] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1550935, 1557370] PinE DDE_Tnp_1 RVT-GII PRK10276 umuC Feature: gene Location: 586378-587109 bp Feature: domain Description: Laminin_G_3 Location: 586699-587053 bp Feature: domain Description: Laminin_G_3 Location: 586699-587053 bp Feature: gene Location: 587106-587315 bp Feature: gene Location: 587765-589252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588170-588860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5881 70-588860 bp Feature: gene Location: 589330-589569 bp Feature: gene Location: 589569-589886 bp Feature: domain Description: PRK10276 Location: 589575-589689 bp Feature: domain Description: PRK1 0276 Location: 589575-589689 bp Feature: domain Description: PRK10276 Location: 589716-589785 bp Feature: domain Description: PRK1 0276 Location: 58971 6-589785 bp Feature: gene Location: 1030252-1030815 bp Feature: domain Description: YbjK Location: 1030258-1030795 bp Feature: domain Description: YbjK Location: 1 030258-1 030795 bp Feature: gene Location: 1030938-1031990 bp Feature: domain Description: int Location: 1030941-1031940 bp Feature: domain Description: int Location: 1 030941 -1 031 940 bp Feature: gene Location: 1032406-1033893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032811-1033501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03281 1 -1 033501 bp Feature: gene Location: 1033992-1034936 bp Feature: gene Location: 1034948-1035883 bp Feature: domain Description: Phage_CI_repr Location: 1035032-1035215 bp Feature: domain Description: Phage_CI_repr Location: 1 035032-1 03521 5 bp Feature: domain Description: Phage_CI_repr Location: 1035344-1035536 bp Feature: domain Description: Phage_CI_repr Location: 1 035344-1 035536 bp Feature: domain Description: Phage_CI_C Location: 1035563-1035857 bp Feature: domain Description: Phage_CI_C Location: 1 035563-1 035857 bp Feature: gene Location: 1375453-1376592 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375636-1376536 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 375636-1 376536 bp Feature: gene Location: 1376763-1377005 bp Feature: domain Description: DinI Location: 1376814-1376994 bp Feature: domain Description: DinI Location: 1 37681 4-1 376994 bp Feature: gene Location: 1377620-1379107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1378025-1378715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 378025-1 37871 5 bp Feature: gene Location: 1379186-1379605 bp Feature: domain Description: PRK10276 Location: 1379189-1379600 bp Feature: domain Description: PRK1 0276 Location: 1 3791 89-1 379600 bp Feature: gene Location: 1379608-1380873 bp Feature: domain Description: umuC Location: 1379611-1380871 bp Feature: domain Description: umuC Location: 1 37961 1 -1 380871 bp Feature: gene Location: 1550935-1551384 bp Feature: domain Description: PinE Location: 1550944-1551376 bp Feature: domain Description: PinE Location: 1 550944-1 551 376 bp Feature: gene Location: 1551711-1552919 bp Feature: domain Description: DDE_Tnp_1 Location: 1551984-1552692 bp Feature: domain Description: DDE_Tnp_1 Location: 1 551 984-1 552692 bp Feature: gene Location: 1554117-1555604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1554522-1555212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 554522-1 55521 2 bp Feature: gene Location: 1555597-1556103 bp Feature: domain Description: PRK10276 Location: 1555687-1556098 bp Feature: domain Description: PRK1 0276 Location: 1 555687-1 556098 bp Feature: gene Location: 1556105-1557370 bp Feature: domain Description: umuC Location: 1556108-1557368 bp Feature: domain Description: umuC Location: 1 5561 08-1 557368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), DDE_Tnp_1 (pfam01609)

Seq: KK036561.1 Klebsiella pneumoniae UCI 44 genomic scaffold adjcL-supercont1.8, whole genome shotgun sequence (35085 bp)
Overview 1 RT 1: 12178-18661 bp Neighborhood of RT #1 [12178, 18663] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 12178-13236 bp Feature: domain Description: YccC Location: 12184-13222 bp Feature: domain Description: YccC Location: 12 184-132 2 2 bp Feature: gene Location: 13335-13808 bp Feature: domain Description: PRK10016 Location: 13338-13797 bp Feature: domain Description: PRK10016 Location: 13338-13797 bp Feature: gene Location: 13890-15377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14295-14985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 95-14985 bp Feature: gene Location: 15895-17058 bp Feature: domain Description: dacD Location: 15898-17053 bp Feature: domain Description: dacD Location: 15898-17053 bp Feature: gene Location: 17239-18663 bp Feature: domain Description: SbcB Location: 17245-18661 bp Feature: domain Description: SbcB Location: 172 45-18661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK036555.1 Klebsiella pneumoniae UCI 44 genomic scaffold adjcL-supercont1.2, whole genome shotgun sequence (2525807 bp)
Overview 1 RT 1: 395413-398894 bp Neighborhood of RT #1 [395413, 398894] Terminase_2 RVT-GII Feature: gene Location: 395413-395997 bp Feature: domain Description: Terminase_2 Location: 395458-395923 bp Feature: domain Description: Terminase_2 Location: 3 95458-3 95923 bp Feature: gene Location: 396075-396332 bp Feature: gene Location: 396733-398220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 397138-397828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 9713 8-3 97828 bp Feature: gene Location: 398317-398655 bp Feature: gene Location: 398655-398894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Terminase_2 (pfam03592), RVT-GII