myRT

myRT report for GCA_000566785.1_Kleb_pneu_UCI_41_V1

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Seq: KK036575.1 Klebsiella pneumoniae UCI 41 genomic scaffold adjcP-supercont1.1, whole genome shotgun sequence (5505970 bp)
Overview 1 RT 1: 585237-588644 bp 2 RT 2: 1027087-1032692 bp 3 RT 3: 1369782-1375200 bp 4 RT 4: 1544494-1550259 bp 5 RT 5: 2863452-2869935 bp 6 RT 6: 3343543-3349254 bp Neighborhood of RT #1 [585237, 588745] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027087, 1032718] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369782, 1375202] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1544494, 1550261] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2863452, 2869937] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [3343543, 3349254] PHA02515 RVT-GII Feature: gene Location: 585237-585968 bp Feature: domain Description: Laminin_G_3 Location: 585558-585912 bp Feature: domain Description: Laminin_G_3 Location: 585558-58591 2 bp Feature: gene Location: 585965-586174 bp Feature: gene Location: 586627-588111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587029-587719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587029-58771 9 bp Feature: gene Location: 588189-588428 bp Feature: gene Location: 588428-588745 bp Feature: domain Description: PRK10276 Location: 588434-588548 bp Feature: domain Description: PRK1 0276 Location: 588434-588548 bp Feature: domain Description: PRK10276 Location: 588575-588644 bp Feature: domain Description: PRK1 0276 Location: 588575-588644 bp Feature: gene Location: 1027087-1027650 bp Feature: domain Description: YbjK Location: 1027093-1027630 bp Feature: domain Description: YbjK Location: 1 027093-1 027630 bp Feature: gene Location: 1027773-1028825 bp Feature: domain Description: int Location: 1027776-1028775 bp Feature: domain Description: int Location: 1 027776-1 028775 bp Feature: gene Location: 1029244-1030728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029646-1030336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029646-1 030336 bp Feature: gene Location: 1030827-1031771 bp Feature: gene Location: 1031783-1032718 bp Feature: domain Description: Phage_CI_repr Location: 1031867-1032050 bp Feature: domain Description: Phage_CI_repr Location: 1 031 867-1 032050 bp Feature: domain Description: Phage_CI_repr Location: 1032179-1032371 bp Feature: domain Description: Phage_CI_repr Location: 1 0321 79-1 032371 bp Feature: domain Description: Phage_CI_C Location: 1032398-1032692 bp Feature: domain Description: Phage_CI_C Location: 1 032398-1 032692 bp Feature: gene Location: 1369782-1370921 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369965-1370865 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 369965-1 370865 bp Feature: gene Location: 1371092-1371334 bp Feature: domain Description: DinI Location: 1371143-1371323 bp Feature: domain Description: DinI Location: 1 371 1 43-1 371 323 bp Feature: gene Location: 1371952-1373436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372354-1373044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372354-1 373044 bp Feature: gene Location: 1373515-1373934 bp Feature: domain Description: PRK10276 Location: 1373518-1373929 bp Feature: domain Description: PRK1 0276 Location: 1 37351 8-1 373929 bp Feature: gene Location: 1373937-1375202 bp Feature: domain Description: umuC Location: 1373940-1375200 bp Feature: domain Description: umuC Location: 1 373940-1 375200 bp Feature: gene Location: 1544494-1545198 bp Feature: domain Description: Rve Location: 1544497-1545142 bp Feature: domain Description: Rve Location: 1 544497-1 5451 42 bp Feature: gene Location: 1545272-1545613 bp Feature: domain Description: PinE Location: 1545275-1545605 bp Feature: domain Description: PinE Location: 1 545275-1 545605 bp Feature: gene Location: 1547011-1548495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1547413-1548103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 54741 3-1 5481 03 bp Feature: gene Location: 1548488-1548994 bp Feature: domain Description: PRK10276 Location: 1548578-1548989 bp Feature: domain Description: PRK1 0276 Location: 1 548578-1 548989 bp Feature: gene Location: 1548996-1550261 bp Feature: domain Description: umuC Location: 1548999-1550259 bp Feature: domain Description: umuC Location: 1 548999-1 550259 bp Feature: gene Location: 2863452-2864510 bp Feature: domain Description: YccC Location: 2863458-2864496 bp Feature: domain Description: YccC Location: 2863458-2864496 bp Feature: gene Location: 2864609-2865082 bp Feature: domain Description: PRK10016 Location: 2864612-2865071 bp Feature: domain Description: PRK1 001 6 Location: 286461 2-2865071 bp Feature: gene Location: 2865164-2866648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2865566-2866256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2865566-2866256 bp Feature: gene Location: 2867169-2868332 bp Feature: domain Description: dacD Location: 2867172-2868327 bp Feature: domain Description: dacD Location: 28671 72-2868327 bp Feature: gene Location: 2868513-2869937 bp Feature: domain Description: SbcB Location: 2868519-2869935 bp Feature: domain Description: SbcB Location: 286851 9-2869935 bp Feature: gene Location: 3343543-3343695 bp Feature: gene Location: 3343704-3346070 bp Feature: domain Description: PHA02515 Location: 3343716-3344058 bp Feature: domain Description: PHA0251 5 Location: 334371 6-3344058 bp Feature: gene Location: 3346611-3348095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3347013-3347703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334701 3-3347703 bp Feature: gene Location: 3348173-3348433 bp Feature: gene Location: 3348748-3349254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional)