myRT

myRT report for GCA_000566805.1_Kleb_pneu_UCI_38_V1

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Seq: KK036582.1 Klebsiella pneumoniae UCI 38 genomic scaffold adjcq-supercont1.1, whole genome shotgun sequence (2707466 bp)
Overview 1 RT 1: 867991-874474 bp 2 RT 2: 1297887-1303598 bp Neighborhood of RT #1 [867991, 874476] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1297887, 1303598] PHA02515 RVT-GII Feature: gene Location: 867991-869049 bp Feature: domain Description: YccC Location: 867997-869035 bp Feature: domain Description: YccC Location: 867997-869035 bp Feature: gene Location: 869148-869621 bp Feature: domain Description: PRK10016 Location: 869151-869610 bp Feature: domain Description: PRK1 001 6 Location: 8691 51 -86961 0 bp Feature: gene Location: 869703-871190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 870108-870798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8701 08-870798 bp Feature: gene Location: 871708-872871 bp Feature: domain Description: dacD Location: 871711-872866 bp Feature: domain Description: dacD Location: 871 71 1 -872866 bp Feature: gene Location: 873052-874476 bp Feature: domain Description: SbcB Location: 873058-874474 bp Feature: domain Description: SbcB Location: 873058-874474 bp Feature: gene Location: 1297887-1298039 bp Feature: gene Location: 1298048-1300414 bp Feature: domain Description: PHA02515 Location: 1298060-1298402 bp Feature: domain Description: PHA0251 5 Location: 1 298060-1 298402 bp Feature: gene Location: 1300952-1302439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1301357-1302047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 301 357-1 302047 bp Feature: gene Location: 1302517-1302777 bp Feature: gene Location: 1303092-1303598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional)

Seq: KK036585.1 Klebsiella pneumoniae UCI 38 genomic scaffold adjcq-supercont1.2, whole genome shotgun sequence (1852647 bp)
Overview 1 RT 1: 297213-303024 bp 2 RT 2: 473200-478564 bp 3 RT 3: 815686-821297 bp 4 RT 4: 1259716-1263168 bp Neighborhood of RT #1 [297213, 303080] umuC PRK10276 RVT-GII PinE Rve Neighborhood of RT #2 [473200, 478620] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [815686, 821317] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [1259716, 1263224] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 297213-298478 bp Feature: domain Description: umuC Location: 297216-298476 bp Feature: domain Description: umuC Location: 2 972 16-2 98476 bp Feature: gene Location: 298480-298986 bp Feature: domain Description: PRK10276 Location: 298570-298981 bp Feature: domain Description: PRK102 76 Location: 2 98570-2 98981 bp Feature: gene Location: 298979-300466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 299384-300074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 99384-300074 bp Feature: gene Location: 301861-302310 bp Feature: domain Description: PinE Location: 301870-302302 bp Feature: domain Description: PinE Location: 301870-302 302 bp Feature: gene Location: 302376-303080 bp Feature: domain Description: Rve Location: 302379-303024 bp Feature: domain Description: Rve Location: 302 379-30302 4 bp Feature: gene Location: 473200-474465 bp Feature: domain Description: umuC Location: 473203-474463 bp Feature: domain Description: umuC Location: 4732 03-474463 bp Feature: gene Location: 474468-474887 bp Feature: domain Description: PRK10276 Location: 474471-474882 bp Feature: domain Description: PRK102 76 Location: 474471-474882 bp Feature: gene Location: 474966-476453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475371-476061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475371-476061 bp Feature: gene Location: 477068-477310 bp Feature: domain Description: DinI Location: 477119-477299 bp Feature: domain Description: DinI Location: 477119-4772 99 bp Feature: gene Location: 477481-478620 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 477664-478564 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 477664-478564 bp Feature: gene Location: 815686-816621 bp Feature: domain Description: Phage_CI_repr Location: 815770-815953 bp Feature: domain Description: Phage_CI_repr Location: 815770-815953 bp Feature: domain Description: Phage_CI_repr Location: 816082-816274 bp Feature: domain Description: Phage_CI_repr Location: 816082 -8162 74 bp Feature: domain Description: Phage_CI_C Location: 816301-816595 bp Feature: domain Description: Phage_CI_C Location: 816301-816595 bp Feature: gene Location: 816633-817577 bp Feature: gene Location: 817676-819163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 818081-818771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 818081-818771 bp Feature: gene Location: 819579-820631 bp Feature: domain Description: int Location: 819582-820581 bp Feature: domain Description: int Location: 819582 -82 0581 bp Feature: gene Location: 820754-821317 bp Feature: domain Description: YbjK Location: 820760-821297 bp Feature: domain Description: YbjK Location: 82 0760-82 12 97 bp Feature: gene Location: 1259716-1260033 bp Feature: domain Description: PRK10276 Location: 1259722-1259836 bp Feature: domain Description: PRK102 76 Location: 12 5972 2 -12 59836 bp Feature: domain Description: PRK10276 Location: 1259863-1259932 bp Feature: domain Description: PRK102 76 Location: 12 59863-12 59932 bp Feature: gene Location: 1260033-1260272 bp Feature: gene Location: 1260350-1261837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260755-1261445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 60755-12 61445 bp Feature: gene Location: 1262287-1262496 bp Feature: gene Location: 1262493-1263224 bp Feature: domain Description: Laminin_G_3 Location: 1262814-1263168 bp Feature: domain Description: Laminin_G_3 Location: 12 62 814-12 63168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961), Rve (COG3316), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)
YbjK (COG3226), Laminin_G_3 (pfam13385)