myRT

myRT report for GCA_000566825.1_Kleb_pneu_UCI_37_V1

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Seq: KK036593.1 Klebsiella pneumoniae UCI 37 genomic scaffold adjcD-supercont1.1, whole genome shotgun sequence (4888367 bp)
Overview 1 RT 1: 583070-586477 bp 2 RT 2: 1025762-1031367 bp 3 RT 3: 1368234-1373652 bp 4 RT 4: 1543774-1549639 bp 5 RT 5: 2848115-2854598 bp 6 RT 6: 3285087-3290798 bp Neighborhood of RT #1 [583070, 586578] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025762, 1031393] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1368234, 1373654] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1543774, 1549641] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2848115, 2854600] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [3285087, 3290798] PHA02515 RVT-GII Feature: gene Location: 583070-583801 bp Feature: domain Description: Laminin_G_3 Location: 583391-583745 bp Feature: domain Description: Laminin_G_3 Location: 583391 -583745 bp Feature: gene Location: 583798-584007 bp Feature: gene Location: 584457-585944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584862-585552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584862-585552 bp Feature: gene Location: 586022-586261 bp Feature: gene Location: 586261-586578 bp Feature: domain Description: PRK10276 Location: 586267-586381 bp Feature: domain Description: PRK1 0276 Location: 586267-586381 bp Feature: domain Description: PRK10276 Location: 586408-586477 bp Feature: domain Description: PRK1 0276 Location: 586408-586477 bp Feature: gene Location: 1025762-1026325 bp Feature: domain Description: YbjK Location: 1025768-1026305 bp Feature: domain Description: YbjK Location: 1 025768-1 026305 bp Feature: gene Location: 1026448-1027500 bp Feature: domain Description: int Location: 1026451-1027450 bp Feature: domain Description: int Location: 1 026451 -1 027450 bp Feature: gene Location: 1027916-1029403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028321-1029011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028321 -1 02901 1 bp Feature: gene Location: 1029502-1030446 bp Feature: gene Location: 1030458-1031393 bp Feature: domain Description: Phage_CI_repr Location: 1030542-1030725 bp Feature: domain Description: Phage_CI_repr Location: 1 030542-1 030725 bp Feature: domain Description: Phage_CI_repr Location: 1030854-1031046 bp Feature: domain Description: Phage_CI_repr Location: 1 030854-1 031 046 bp Feature: domain Description: Phage_CI_C Location: 1031073-1031367 bp Feature: domain Description: Phage_CI_C Location: 1 031 073-1 031 367 bp Feature: gene Location: 1368234-1369373 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368417-1369317 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36841 7-1 36931 7 bp Feature: gene Location: 1369544-1369786 bp Feature: domain Description: DinI Location: 1369595-1369775 bp Feature: domain Description: DinI Location: 1 369595-1 369775 bp Feature: gene Location: 1370401-1371888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370806-1371496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370806-1 371 496 bp Feature: gene Location: 1371967-1372386 bp Feature: domain Description: PRK10276 Location: 1371970-1372381 bp Feature: domain Description: PRK1 0276 Location: 1 371 970-1 372381 bp Feature: gene Location: 1372389-1373654 bp Feature: domain Description: umuC Location: 1372392-1373652 bp Feature: domain Description: umuC Location: 1 372392-1 373652 bp Feature: gene Location: 1543774-1544478 bp Feature: domain Description: Rve Location: 1543777-1544422 bp Feature: domain Description: Rve Location: 1 543777-1 544422 bp Feature: gene Location: 1544544-1544993 bp Feature: domain Description: PinE Location: 1544553-1544985 bp Feature: domain Description: PinE Location: 1 544553-1 544985 bp Feature: gene Location: 1546388-1547875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546793-1547483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 546793-1 547483 bp Feature: gene Location: 1547868-1548374 bp Feature: domain Description: PRK10276 Location: 1547958-1548369 bp Feature: domain Description: PRK1 0276 Location: 1 547958-1 548369 bp Feature: gene Location: 1548376-1549641 bp Feature: domain Description: umuC Location: 1548379-1549639 bp Feature: domain Description: umuC Location: 1 548379-1 549639 bp Feature: gene Location: 2848115-2849173 bp Feature: domain Description: YccC Location: 2848121-2849159 bp Feature: domain Description: YccC Location: 28481 21 -28491 59 bp Feature: gene Location: 2849272-2849745 bp Feature: domain Description: PRK10016 Location: 2849275-2849734 bp Feature: domain Description: PRK1 001 6 Location: 2849275-2849734 bp Feature: gene Location: 2849827-2851314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2850232-2850922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2850232-2850922 bp Feature: gene Location: 2851832-2852995 bp Feature: domain Description: dacD Location: 2851835-2852990 bp Feature: domain Description: dacD Location: 2851 835-2852990 bp Feature: gene Location: 2853176-2854600 bp Feature: domain Description: SbcB Location: 2853182-2854598 bp Feature: domain Description: SbcB Location: 28531 82-2854598 bp Feature: gene Location: 3285087-3285239 bp Feature: gene Location: 3285248-3287614 bp Feature: domain Description: PHA02515 Location: 3285260-3285602 bp Feature: domain Description: PHA0251 5 Location: 3285260-3285602 bp Feature: gene Location: 3288152-3289639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3288557-3289247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3288557-3289247 bp Feature: gene Location: 3289717-3289977 bp Feature: gene Location: 3290292-3290798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional)