myRT

myRT report for GCA_000566865.1_Kleb_pneu_UCI_33_V1

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Seq: KK036625.1 Klebsiella pneumoniae UCI 33 genomic scaffold adjcG-supercont1.2, whole genome shotgun sequence (88153 bp)
Overview 1 RT 1: 84667-87861 bp Neighborhood of RT #1 [84667, 88153] umuC PRK10276 RVT-GII Feature: gene Location: 84667-85938 bp Feature: domain Description: umuC Location: 84670-85933 bp Feature: domain Description: umuC Location: 84670-85933 bp Feature: gene Location: 85938-86363 bp Feature: domain Description: PRK10276 Location: 85941-86349 bp Feature: domain Description: PRK1 0276 Location: 85941 -86349 bp Feature: gene Location: 86766-88153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87171-87861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 71 -87861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK036616.1 Klebsiella pneumoniae UCI 33 genomic scaffold adjcG-supercont1.1, whole genome shotgun sequence (5378450 bp)
Overview 1 RT 1: 583740-587147 bp 2 RT 2: 1025086-1030691 bp 3 RT 3: 1367591-1373009 bp 4 RT 4: 2123039-2127692 bp 5 RT 5: 2719731-2726214 bp Neighborhood of RT #1 [583740, 587248] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025086, 1030717] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367591, 1373011] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2123039, 2127694] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT YncL Neighborhood of RT #5 [2719731, 2726216] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583740-584471 bp Feature: domain Description: Laminin_G_3 Location: 584061-584415 bp Feature: domain Description: Laminin_G_3 Location: 584061-584415 bp Feature: gene Location: 584468-584677 bp Feature: gene Location: 585127-586614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585532-586222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585532 -5862 2 2 bp Feature: gene Location: 586692-586931 bp Feature: gene Location: 586931-587248 bp Feature: domain Description: PRK10276 Location: 586937-587051 bp Feature: domain Description: PRK102 76 Location: 586937-587051 bp Feature: domain Description: PRK10276 Location: 587078-587147 bp Feature: domain Description: PRK102 76 Location: 587078-587147 bp Feature: gene Location: 1025086-1025649 bp Feature: domain Description: YbjK Location: 1025092-1025629 bp Feature: domain Description: YbjK Location: 102 5092 -102 562 9 bp Feature: gene Location: 1025772-1026824 bp Feature: domain Description: int Location: 1025775-1026774 bp Feature: domain Description: int Location: 102 5775-102 6774 bp Feature: gene Location: 1027240-1028727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027645-1028335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 7645-102 8335 bp Feature: gene Location: 1028826-1029770 bp Feature: gene Location: 1029782-1030717 bp Feature: domain Description: Phage_CI_repr Location: 1029866-1030049 bp Feature: domain Description: Phage_CI_repr Location: 102 9866-1030049 bp Feature: domain Description: Phage_CI_repr Location: 1030178-1030370 bp Feature: domain Description: Phage_CI_repr Location: 1030178-1030370 bp Feature: domain Description: Phage_CI_C Location: 1030397-1030691 bp Feature: domain Description: Phage_CI_C Location: 1030397-1030691 bp Feature: gene Location: 1367591-1368730 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367774-1368674 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367774-1368674 bp Feature: gene Location: 1368901-1369143 bp Feature: domain Description: DinI Location: 1368952-1369132 bp Feature: domain Description: DinI Location: 1368952 -1369132 bp Feature: gene Location: 1369758-1371245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370163-1370853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370163-1370853 bp Feature: gene Location: 1371324-1371743 bp Feature: domain Description: PRK10276 Location: 1371327-1371738 bp Feature: domain Description: PRK102 76 Location: 137132 7-1371738 bp Feature: gene Location: 1371746-1373011 bp Feature: domain Description: umuC Location: 1371749-1373009 bp Feature: domain Description: umuC Location: 1371749-1373009 bp Feature: gene Location: 2123039-2124472 bp Feature: domain Description: ALDH_SaliADH Location: 2123174-2124443 bp Feature: domain Description: ALDH_SaliADH Location: 2 12 3174-2 12 4443 bp Feature: gene Location: 2124486-2125235 bp Feature: domain Description: MhpC Location: 2124498-2125227 bp Feature: domain Description: MhpC Location: 2 12 4498-2 12 52 2 7 bp Feature: gene Location: 2125317-2126804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2125722-2126412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 12 572 2 -2 12 6412 bp Feature: gene Location: 2127234-2127407 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2127246-2127405 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2 12 72 46-2 12 7405 bp Feature: gene Location: 2127602-2127694 bp Feature: domain Description: YncL Location: 2127605-2127692 bp Feature: domain Description: YncL Location: 2 12 7605-2 12 7692 bp Feature: gene Location: 2719731-2720789 bp Feature: domain Description: YccC Location: 2719737-2720775 bp Feature: domain Description: YccC Location: 2 719737-2 72 0775 bp Feature: gene Location: 2720888-2721361 bp Feature: domain Description: PRK10016 Location: 2720891-2721350 bp Feature: domain Description: PRK10016 Location: 2 72 0891-2 72 1350 bp Feature: gene Location: 2721443-2722930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2721848-2722538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 1848-2 72 2 538 bp Feature: gene Location: 2723448-2724611 bp Feature: domain Description: dacD Location: 2723451-2724606 bp Feature: domain Description: dacD Location: 2 72 3451-2 72 4606 bp Feature: gene Location: 2724792-2726216 bp Feature: domain Description: SbcB Location: 2724798-2726214 bp Feature: domain Description: SbcB Location: 2 72 4798-2 72 62 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
ALDH_SaliADH (cd07105), MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), YncL (NF000537), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)