myRT

myRT report for GCA_000566925.1_Kleb_pneu_UCI_22_V1

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Seq: KK036642.1 Klebsiella pneumoniae UCI 22 genomic scaffold adjbl-supercont1.4, whole genome shotgun sequence (184489 bp)
Overview 1 RT 1: 181003-184197 bp Neighborhood of RT #1 [181003, 184489] umuC PRK10276 RVT-GII Feature: gene Location: 181003-182274 bp Feature: domain Description: umuC Location: 181006-182269 bp Feature: domain Description: umuC Location: 1 81 006-1 82269 bp Feature: gene Location: 182274-182699 bp Feature: domain Description: PRK10276 Location: 182277-182685 bp Feature: domain Description: PRK1 0276 Location: 1 82277-1 82685 bp Feature: gene Location: 183102-184489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183507-184197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 83507-1 841 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK036637.1 Klebsiella pneumoniae UCI 22 genomic scaffold adjbl-supercont1.1, whole genome shotgun sequence (4113624 bp)
Overview 1 RT 1: 2739054-2744418 bp 2 RT 2: 3082787-3088398 bp 3 RT 3: 3526257-3529709 bp Neighborhood of RT #1 [2739054, 2744474] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #2 [3082787, 3088418] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #3 [3526257, 3529765] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 2739054-2740319 bp Feature: domain Description: umuC Location: 2739057-2740317 bp Feature: domain Description: umuC Location: 2 739057-2 740317 bp Feature: gene Location: 2740322-2740741 bp Feature: domain Description: PRK10276 Location: 2740325-2740736 bp Feature: domain Description: PRK102 76 Location: 2 74032 5-2 740736 bp Feature: gene Location: 2740820-2742307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2741225-2741915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7412 2 5-2 741915 bp Feature: gene Location: 2742922-2743164 bp Feature: domain Description: DinI Location: 2742973-2743153 bp Feature: domain Description: DinI Location: 2 742 973-2 743153 bp Feature: gene Location: 2743335-2744474 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2743518-2744418 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 743518-2 744418 bp Feature: gene Location: 3082787-3083722 bp Feature: domain Description: Phage_CI_repr Location: 3082871-3083054 bp Feature: domain Description: Phage_CI_repr Location: 3082 871-3083054 bp Feature: domain Description: Phage_CI_repr Location: 3083183-3083375 bp Feature: domain Description: Phage_CI_repr Location: 3083183-3083375 bp Feature: domain Description: Phage_CI_C Location: 3083402-3083696 bp Feature: domain Description: Phage_CI_C Location: 3083402 -3083696 bp Feature: gene Location: 3083734-3084678 bp Feature: gene Location: 3084777-3086264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085182-3085872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3085182 -3085872 bp Feature: gene Location: 3086680-3087732 bp Feature: domain Description: int Location: 3086683-3087682 bp Feature: domain Description: int Location: 3086683-3087682 bp Feature: gene Location: 3087855-3088418 bp Feature: domain Description: YbjK Location: 3087861-3088398 bp Feature: domain Description: YbjK Location: 3087861-3088398 bp Feature: gene Location: 3526257-3526574 bp Feature: domain Description: PRK10276 Location: 3526263-3526377 bp Feature: domain Description: PRK102 76 Location: 352 62 63-352 6377 bp Feature: domain Description: PRK10276 Location: 3526404-3526473 bp Feature: domain Description: PRK102 76 Location: 352 6404-352 6473 bp Feature: gene Location: 3526574-3526813 bp Feature: gene Location: 3526891-3528378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3527296-3527986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 72 96-352 7986 bp Feature: gene Location: 3528828-3529037 bp Feature: gene Location: 3529034-3529765 bp Feature: domain Description: Laminin_G_3 Location: 3529355-3529709 bp Feature: domain Description: Laminin_G_3 Location: 352 9355-352 9709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)