myRT

myRT report for GCA_000566985.1_Kleb_pneu_UCI_19_V1

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Seq: KK036664.1 Klebsiella pneumoniae UCI 19 genomic scaffold adjcn-supercont1.2, whole genome shotgun sequence (1230998 bp)
Overview 1 RT 1: 563147-566554 bp 2 RT 2: 1004180-1009785 bp Neighborhood of RT #1 [563147, 566655] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1004180, 1009811] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 563147-563878 bp Feature: domain Description: Laminin_G_3 Location: 563468-563822 bp Feature: domain Description: Laminin_G_3 Location: 563468-563822 bp Feature: gene Location: 563875-564084 bp Feature: gene Location: 564537-566021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564939-565629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564939-565629 bp Feature: gene Location: 566099-566338 bp Feature: gene Location: 566338-566655 bp Feature: domain Description: PRK10276 Location: 566344-566458 bp Feature: domain Description: PRK1 0276 Location: 566344-566458 bp Feature: domain Description: PRK10276 Location: 566485-566554 bp Feature: domain Description: PRK1 0276 Location: 566485-566554 bp Feature: gene Location: 1004180-1004743 bp Feature: domain Description: YbjK Location: 1004186-1004723 bp Feature: domain Description: YbjK Location: 1 0041 86-1 004723 bp Feature: gene Location: 1004866-1005918 bp Feature: domain Description: int Location: 1004869-1005868 bp Feature: domain Description: int Location: 1 004869-1 005868 bp Feature: gene Location: 1006337-1007821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006739-1007429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 006739-1 007429 bp Feature: gene Location: 1007920-1008864 bp Feature: gene Location: 1008876-1009811 bp Feature: domain Description: Phage_CI_repr Location: 1008960-1009143 bp Feature: domain Description: Phage_CI_repr Location: 1 008960-1 0091 43 bp Feature: domain Description: Phage_CI_repr Location: 1009272-1009464 bp Feature: domain Description: Phage_CI_repr Location: 1 009272-1 009464 bp Feature: domain Description: Phage_CI_C Location: 1009491-1009785 bp Feature: domain Description: Phage_CI_C Location: 1 009491 -1 009785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)

Seq: KK036663.1 Klebsiella pneumoniae UCI 19 genomic scaffold adjcn-supercont1.1, whole genome shotgun sequence (4059945 bp)
Overview 1 RT 1: 2549469-2555940 bp 2 RT 2: 3893443-3898807 bp Neighborhood of RT #1 [2549469, 2555954] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3893443, 3898863] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 2549469-2550893 bp Feature: domain Description: SbcB Location: 2549475-2550891 bp Feature: domain Description: SbcB Location: 2 549475-2 550891 bp Feature: gene Location: 2551074-2552237 bp Feature: domain Description: dacD Location: 2551077-2552232 bp Feature: domain Description: dacD Location: 2 551077-2 552 2 32 bp Feature: gene Location: 2552758-2554242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2553160-2553850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 553160-2 553850 bp Feature: gene Location: 2554324-2554797 bp Feature: domain Description: PRK10016 Location: 2554327-2554786 bp Feature: domain Description: PRK10016 Location: 2 55432 7-2 554786 bp Feature: gene Location: 2554896-2555954 bp Feature: domain Description: YccC Location: 2554902-2555940 bp Feature: domain Description: YccC Location: 2 554902 -2 555940 bp Feature: gene Location: 3893443-3894708 bp Feature: domain Description: umuC Location: 3893446-3894706 bp Feature: domain Description: umuC Location: 3893446-3894706 bp Feature: gene Location: 3894711-3895130 bp Feature: domain Description: PRK10276 Location: 3894714-3895125 bp Feature: domain Description: PRK102 76 Location: 3894714-389512 5 bp Feature: gene Location: 3895209-3896693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3895611-3896301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3895611-3896301 bp Feature: gene Location: 3897311-3897553 bp Feature: domain Description: DinI Location: 3897362-3897542 bp Feature: domain Description: DinI Location: 3897362 -3897542 bp Feature: gene Location: 3897724-3898863 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3897907-3898807 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3897907-3898807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789)