myRT

myRT report for GCA_000567005.1_Kleb_pneu_UCI_18_V1

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Seq: KK036666.1 Klebsiella variicola strain UCI 18 genomic scaffold adjcN-supercont1.1, whole genome shotgun sequence (3320953 bp)
Overview 1 RT 1: 2724524-2731337 bp Neighborhood of RT #1 [2724524, 2731339] AAA_23 PRK03918 AAA_15 RVT-Retrons PRK09812 MazE Feature: gene Location: 2724524-2726404 bp Feature: domain Description: AAA_23 Location: 2724593-2725301 bp Feature: domain Description: AAA_23 Location: 2724593-2725301 bp Feature: domain Description: PRK03918 Location: 2725610-2725886 bp Feature: domain Description: PRK0391 8 Location: 272561 0-2725886 bp Feature: gene Location: 2726957-2729203 bp Feature: domain Description: AAA_15 Location: 2726960-2727968 bp Feature: domain Description: AAA_1 5 Location: 2726960-2727968 bp Feature: gene Location: 2729318-2730418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2729501-2730029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2729501 -2730029 bp Feature: gene Location: 2730749-2731081 bp Feature: domain Description: PRK09812 Location: 2730755-2731076 bp Feature: domain Description: PRK0981 2 Location: 2730755-2731 076 bp Feature: gene Location: 2731082-2731339 bp Feature: domain Description: MazE Location: 2731094-2731337 bp Feature: domain Description: MazE Location: 2731 094-2731 337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), PRK03918 (DNA double-strand break repair ATPase Rad50), AAA_15 (pfam13175), RVT-Retrons, PRK09812 (type II toxin-antitoxin system ChpB family toxin), MazE (COG2336)

Seq: KK036670.1 Klebsiella variicola strain UCI 18 genomic scaffold adjcN-supercont1.5, whole genome shotgun sequence (276102 bp)
Overview 1 RT 1: 242420-248663 bp Neighborhood of RT #1 [242420, 248728] dCache_1 GGDEF PFDH_like RVT-GII GIIM PHA02517 Feature: gene Location: 242420-243985 bp Feature: domain Description: dCache_1 Location: 242507-243179 bp Feature: domain Description: dCache_1 Location: 2 42 507-2 43179 bp Feature: domain Description: GGDEF Location: 243476-243926 bp Feature: domain Description: GGDEF Location: 2 43476-2 4392 6 bp Feature: gene Location: 244444-245577 bp Feature: domain Description: PFDH_like Location: 244447-245575 bp Feature: domain Description: PFDH_like Location: 2 44447-2 45575 bp Feature: gene Location: 246354-247712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246462-247194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 46462 -2 47194 bp Feature: domain Description: GIIM Note: maturase Location: 247272-247467 bp Feature: domain Description: GIIM Note: maturase Location: 2 472 72 -2 47467 bp Feature: gene Location: 247948-248562 bp Feature: gene Location: 248465-248728 bp Feature: domain Description: PHA02517 Location: 248471-248663 bp Feature: domain Description: PHA02 517 Location: 2 48471-2 48663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dCache_1 (pfam02743), GGDEF (TIGR00254), PFDH_like (cd08282), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)