myRT

myRT report for GCA_000567025.1_Kleb_pneu_BIDMC_45_V1

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Seq: KK036682.1 Klebsiella pneumoniae BIDMC 45 genomic scaffold adjbG-supercont1.6, whole genome shotgun sequence (207653 bp)
Overview 1 RT 1: 119156-124147 bp Neighborhood of RT #1 [119156, 124152] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 119156-119581 bp Feature: domain Description: Antirestrict Location: 119291-119579 bp Feature: domain Description: Antirestrict Location: 1 1 9291 -1 1 9579 bp Feature: gene Location: 120102-120332 bp Feature: gene Location: 120566-122053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120971-121661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 20971 -1 21 661 bp Feature: gene Location: 122456-122881 bp Feature: domain Description: PRK10276 Location: 122459-122867 bp Feature: domain Description: PRK1 0276 Location: 1 22459-1 22867 bp Feature: gene Location: 122881-124152 bp Feature: domain Description: umuC Location: 122884-124147 bp Feature: domain Description: umuC Location: 1 22884-1 241 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK036679.1 Klebsiella pneumoniae BIDMC 45 genomic scaffold adjbG-supercont1.3, whole genome shotgun sequence (1004623 bp)
Overview 1 RT 1: 337207-340614 bp 2 RT 2: 780164-785769 bp Neighborhood of RT #1 [337207, 340715] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [780164, 785795] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 337207-337938 bp Feature: domain Description: Laminin_G_3 Location: 337528-337882 bp Feature: domain Description: Laminin_G_3 Location: 33752 8-337882 bp Feature: gene Location: 337935-338144 bp Feature: gene Location: 338594-340081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338999-339689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338999-339689 bp Feature: gene Location: 340159-340398 bp Feature: gene Location: 340398-340715 bp Feature: domain Description: PRK10276 Location: 340404-340518 bp Feature: domain Description: PRK102 76 Location: 340404-340518 bp Feature: domain Description: PRK10276 Location: 340545-340614 bp Feature: domain Description: PRK102 76 Location: 340545-340614 bp Feature: gene Location: 780164-780727 bp Feature: domain Description: YbjK Location: 780170-780707 bp Feature: domain Description: YbjK Location: 780170-780707 bp Feature: gene Location: 780850-781902 bp Feature: domain Description: int Location: 780853-781852 bp Feature: domain Description: int Location: 780853-781852 bp Feature: gene Location: 782318-783805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782723-783413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782 72 3-783413 bp Feature: gene Location: 783904-784848 bp Feature: gene Location: 784860-785795 bp Feature: domain Description: Phage_CI_repr Location: 784944-785127 bp Feature: domain Description: Phage_CI_repr Location: 784944-78512 7 bp Feature: domain Description: Phage_CI_repr Location: 785256-785448 bp Feature: domain Description: Phage_CI_repr Location: 7852 56-785448 bp Feature: domain Description: Phage_CI_C Location: 785475-785769 bp Feature: domain Description: Phage_CI_C Location: 785475-785769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)

Seq: KK036681.1 Klebsiella pneumoniae BIDMC 45 genomic scaffold adjbG-supercont1.5, whole genome shotgun sequence (342579 bp)
Overview 1 RT 1: 165751-171169 bp Neighborhood of RT #1 [165751, 171171] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 165751-166890 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 165934-166834 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 16593 4-16683 4 bp Feature: gene Location: 167061-167303 bp Feature: domain Description: DinI Location: 167112-167292 bp Feature: domain Description: DinI Location: 167112-167292 bp Feature: gene Location: 167918-169405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168323-169013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1683 23 -169013 bp Feature: gene Location: 169484-169903 bp Feature: domain Description: PRK10276 Location: 169487-169898 bp Feature: domain Description: PRK10276 Location: 169487-169898 bp Feature: gene Location: 169906-171171 bp Feature: domain Description: umuC Location: 169909-171169 bp Feature: domain Description: umuC Location: 169909-171169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK036675.1 Klebsiella pneumoniae BIDMC 45 genomic scaffold adjbG-supercont1.1, whole genome shotgun sequence (1758277 bp)
Overview 1 RT 1: 6050-11915 bp 2 RT 2: 1246109-1252592 bp Neighborhood of RT #1 [6050, 11917] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1246109, 1252594] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 6050-6754 bp Feature: domain Description: Rve Location: 6053-6698 bp Feature: domain Description: Rve Location: 6053-6698 bp Feature: gene Location: 6820-7269 bp Feature: domain Description: PinE Location: 6829-7261 bp Feature: domain Description: PinE Location: 6829-7261 bp Feature: gene Location: 8664-10151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9069-9759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9069-9759 bp Feature: gene Location: 10144-10650 bp Feature: domain Description: PRK10276 Location: 10234-10645 bp Feature: domain Description: PRK10276 Location: 10234 -1064 5 bp Feature: gene Location: 10652-11917 bp Feature: domain Description: umuC Location: 10655-11915 bp Feature: domain Description: umuC Location: 10655-11915 bp Feature: gene Location: 1246109-1247167 bp Feature: domain Description: YccC Location: 1246115-1247153 bp Feature: domain Description: YccC Location: 124 6115-124 7153 bp Feature: gene Location: 1247266-1247739 bp Feature: domain Description: PRK10016 Location: 1247269-1247728 bp Feature: domain Description: PRK10016 Location: 124 7269-124 7728 bp Feature: gene Location: 1247821-1249308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248226-1248916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124 8226-124 8916 bp Feature: gene Location: 1249826-1250989 bp Feature: domain Description: dacD Location: 1249829-1250984 bp Feature: domain Description: dacD Location: 124 9829-1250984 bp Feature: gene Location: 1251170-1252594 bp Feature: domain Description: SbcB Location: 1251176-1252592 bp Feature: domain Description: SbcB Location: 1251176-1252592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), RVT-GII, YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)