myRT

myRT report for GCA_000567185.1_Kleb_pneu_BIDMC_42b_V1

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Seq: KK036724.1 Klebsiella pneumoniae BIDMC 42b genomic scaffold adjbT-supercont1.1, whole genome shotgun sequence (3289587 bp)
Overview 1 RT 1: 682268-688751 bp Neighborhood of RT #1 [682268, 688753] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 682268-683326 bp Feature: domain Description: YccC Location: 682274-683312 bp Feature: domain Description: YccC Location: 682274-68331 2 bp Feature: gene Location: 683425-683898 bp Feature: domain Description: PRK10016 Location: 683428-683887 bp Feature: domain Description: PRK1 001 6 Location: 683428-683887 bp Feature: gene Location: 683980-685464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 684382-685072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 684382-685072 bp Feature: gene Location: 685985-687148 bp Feature: domain Description: dacD Location: 685988-687143 bp Feature: domain Description: dacD Location: 685988-6871 43 bp Feature: gene Location: 687329-688753 bp Feature: domain Description: SbcB Location: 687335-688751 bp Feature: domain Description: SbcB Location: 687335-688751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK036725.1 Klebsiella pneumoniae BIDMC 42b genomic scaffold adjbT-supercont1.2, whole genome shotgun sequence (1902179 bp)
Overview 1 RT 1: 584833-588240 bp 2 RT 2: 1018061-1023666 bp 3 RT 3: 1360413-1365831 bp Neighborhood of RT #1 [584833, 588341] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1018061, 1023692] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1360413, 1365833] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 584833-585564 bp Feature: domain Description: Laminin_G_3 Location: 585154-585508 bp Feature: domain Description: Laminin_G_3 Location: 585154-585508 bp Feature: gene Location: 585561-585770 bp Feature: gene Location: 586223-587707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586625-587315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58662 5-587315 bp Feature: gene Location: 587785-588024 bp Feature: gene Location: 588024-588341 bp Feature: domain Description: PRK10276 Location: 588030-588144 bp Feature: domain Description: PRK102 76 Location: 588030-588144 bp Feature: domain Description: PRK10276 Location: 588171-588240 bp Feature: domain Description: PRK102 76 Location: 588171-5882 40 bp Feature: gene Location: 1018061-1018624 bp Feature: domain Description: YbjK Location: 1018067-1018604 bp Feature: domain Description: YbjK Location: 1018067-1018604 bp Feature: gene Location: 1018747-1019799 bp Feature: domain Description: int Location: 1018750-1019749 bp Feature: domain Description: int Location: 1018750-1019749 bp Feature: gene Location: 1020218-1021702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1020620-1021310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 062 0-102 1310 bp Feature: gene Location: 1021801-1022745 bp Feature: gene Location: 1022757-1023692 bp Feature: domain Description: Phage_CI_repr Location: 1022841-1023024 bp Feature: domain Description: Phage_CI_repr Location: 102 2 841-102 302 4 bp Feature: domain Description: Phage_CI_repr Location: 1023153-1023345 bp Feature: domain Description: Phage_CI_repr Location: 102 3153-102 3345 bp Feature: domain Description: Phage_CI_C Location: 1023372-1023666 bp Feature: domain Description: Phage_CI_C Location: 102 3372 -102 3666 bp Feature: gene Location: 1360413-1361552 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1360596-1361496 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1360596-1361496 bp Feature: gene Location: 1361723-1361965 bp Feature: domain Description: DinI Location: 1361774-1361954 bp Feature: domain Description: DinI Location: 1361774-1361954 bp Feature: gene Location: 1362583-1364067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362985-1363675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362 985-1363675 bp Feature: gene Location: 1364146-1364565 bp Feature: domain Description: PRK10276 Location: 1364149-1364560 bp Feature: domain Description: PRK102 76 Location: 1364149-1364560 bp Feature: gene Location: 1364568-1365833 bp Feature: domain Description: umuC Location: 1364571-1365831 bp Feature: domain Description: umuC Location: 1364571-1365831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)