myRT

myRT report for GCA_000567205.1_Kleb_pneu_BIDMC_42a_V1

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Seq: KK036732.1 Klebsiella pneumoniae BIDMC 42a genomic scaffold adjbj-supercont1.1, whole genome shotgun sequence (2676419 bp)
Overview 1 RT 1: 705428-711911 bp Neighborhood of RT #1 [705428, 711913] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 705428-706486 bp Feature: domain Description: YccC Location: 705434-706472 bp Feature: domain Description: YccC Location: 705434-706472 bp Feature: gene Location: 706585-707058 bp Feature: domain Description: PRK10016 Location: 706588-707047 bp Feature: domain Description: PRK1 001 6 Location: 706588-707047 bp Feature: gene Location: 707140-708627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707545-708235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707545-708235 bp Feature: gene Location: 709145-710308 bp Feature: domain Description: dacD Location: 709148-710303 bp Feature: domain Description: dacD Location: 7091 48-71 0303 bp Feature: gene Location: 710489-711913 bp Feature: domain Description: SbcB Location: 710495-711911 bp Feature: domain Description: SbcB Location: 71 0495-71 1 91 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK036733.1 Klebsiella pneumoniae BIDMC 42a genomic scaffold adjbj-supercont1.2, whole genome shotgun sequence (1979299 bp)
Overview 1 RT 1: 614355-619719 bp 2 RT 2: 956507-962118 bp 3 RT 3: 1391438-1394890 bp Neighborhood of RT #1 [614355, 619775] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #2 [956507, 962138] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #3 [1391438, 1394946] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 614355-615620 bp Feature: domain Description: umuC Location: 614358-615618 bp Feature: domain Description: umuC Location: 614358-615618 bp Feature: gene Location: 615623-616042 bp Feature: domain Description: PRK10276 Location: 615626-616037 bp Feature: domain Description: PRK102 76 Location: 61562 6-616037 bp Feature: gene Location: 616121-617608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616526-617216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61652 6-6172 16 bp Feature: gene Location: 618223-618465 bp Feature: domain Description: DinI Location: 618274-618454 bp Feature: domain Description: DinI Location: 6182 74-618454 bp Feature: gene Location: 618636-619775 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 618819-619719 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 618819-619719 bp Feature: gene Location: 956507-957442 bp Feature: domain Description: Phage_CI_repr Location: 956591-956774 bp Feature: domain Description: Phage_CI_repr Location: 956591-956774 bp Feature: domain Description: Phage_CI_repr Location: 956903-957095 bp Feature: domain Description: Phage_CI_repr Location: 956903-957095 bp Feature: domain Description: Phage_CI_C Location: 957122-957416 bp Feature: domain Description: Phage_CI_C Location: 95712 2 -957416 bp Feature: gene Location: 957454-958398 bp Feature: gene Location: 958497-959984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958902-959592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 958902 -959592 bp Feature: gene Location: 960400-961452 bp Feature: domain Description: int Location: 960403-961402 bp Feature: domain Description: int Location: 960403-961402 bp Feature: gene Location: 961575-962138 bp Feature: domain Description: YbjK Location: 961581-962118 bp Feature: domain Description: YbjK Location: 961581-962 118 bp Feature: gene Location: 1391438-1391755 bp Feature: domain Description: PRK10276 Location: 1391444-1391558 bp Feature: domain Description: PRK102 76 Location: 1391444-1391558 bp Feature: domain Description: PRK10276 Location: 1391585-1391654 bp Feature: domain Description: PRK102 76 Location: 1391585-1391654 bp Feature: gene Location: 1391755-1391994 bp Feature: gene Location: 1392072-1393559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1392477-1393167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1392 477-1393167 bp Feature: gene Location: 1394009-1394218 bp Feature: gene Location: 1394215-1394946 bp Feature: domain Description: Laminin_G_3 Location: 1394536-1394890 bp Feature: domain Description: Laminin_G_3 Location: 1394536-1394890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)