myRT

myRT report for GCA_000567265.1_Kleb_pneu_BIDMC_32_V1

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Seq: KK036759.1 Klebsiella pneumoniae BIDMC 32 genomic scaffold adjbt-supercont1.3, whole genome shotgun sequence (200794 bp)
Overview 1 RT 1: 121860-126854 bp Neighborhood of RT #1 [121860, 126856] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 121860-123131 bp Feature: domain Description: umuC Location: 121863-123126 bp Feature: domain Description: umuC Location: 1 21 863-1 231 26 bp Feature: gene Location: 123131-123556 bp Feature: domain Description: PRK10276 Location: 123134-123542 bp Feature: domain Description: PRK1 0276 Location: 1 231 34-1 23542 bp Feature: gene Location: 123962-125446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124364-125054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24364-1 25054 bp Feature: gene Location: 125680-125910 bp Feature: gene Location: 126431-126856 bp Feature: domain Description: Antirestrict Location: 126566-126854 bp Feature: domain Description: Antirestrict Location: 1 26566-1 26854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KK036749.1 Klebsiella pneumoniae BIDMC 32 genomic scaffold adjbt-supercont1.1, whole genome shotgun sequence (3410885 bp)
Overview 1 RT 1: 717473-723944 bp 2 RT 2: 2038894-2044258 bp 3 RT 3: 2381056-2386667 bp 4 RT 4: 2825772-2829224 bp Neighborhood of RT #1 [717473, 723958] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [2038894, 2044314] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [2381056, 2386687] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [2825772, 2829280] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 717473-718897 bp Feature: domain Description: SbcB Location: 717479-718895 bp Feature: domain Description: SbcB Location: 717479-718895 bp Feature: gene Location: 719078-720241 bp Feature: domain Description: dacD Location: 719081-720236 bp Feature: domain Description: dacD Location: 719081-72 02 36 bp Feature: gene Location: 720762-722246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 721164-721854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 1164-72 1854 bp Feature: gene Location: 722328-722801 bp Feature: domain Description: PRK10016 Location: 722331-722790 bp Feature: domain Description: PRK10016 Location: 72 2 331-72 2 790 bp Feature: gene Location: 722900-723958 bp Feature: domain Description: YccC Location: 722906-723944 bp Feature: domain Description: YccC Location: 72 2 906-72 3944 bp Feature: gene Location: 2038894-2040159 bp Feature: domain Description: umuC Location: 2038897-2040157 bp Feature: domain Description: umuC Location: 2 038897-2 040157 bp Feature: gene Location: 2040162-2040581 bp Feature: domain Description: PRK10276 Location: 2040165-2040576 bp Feature: domain Description: PRK102 76 Location: 2 040165-2 040576 bp Feature: gene Location: 2040660-2042144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041062-2041752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 041062 -2 041752 bp Feature: gene Location: 2042762-2043004 bp Feature: domain Description: DinI Location: 2042813-2042993 bp Feature: domain Description: DinI Location: 2 042 813-2 042 993 bp Feature: gene Location: 2043175-2044314 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2043358-2044258 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 043358-2 0442 58 bp Feature: gene Location: 2381056-2381991 bp Feature: domain Description: Phage_CI_repr Location: 2381140-2381323 bp Feature: domain Description: Phage_CI_repr Location: 2 381140-2 38132 3 bp Feature: domain Description: Phage_CI_repr Location: 2381452-2381644 bp Feature: domain Description: Phage_CI_repr Location: 2 381452 -2 381644 bp Feature: domain Description: Phage_CI_C Location: 2381671-2381965 bp Feature: domain Description: Phage_CI_C Location: 2 381671-2 381965 bp Feature: gene Location: 2382003-2382947 bp Feature: gene Location: 2383046-2384530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2383448-2384138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 383448-2 384138 bp Feature: gene Location: 2384949-2386001 bp Feature: domain Description: int Location: 2384952-2385951 bp Feature: domain Description: int Location: 2 384952 -2 385951 bp Feature: gene Location: 2386124-2386687 bp Feature: domain Description: YbjK Location: 2386130-2386667 bp Feature: domain Description: YbjK Location: 2 386130-2 386667 bp Feature: gene Location: 2825772-2826089 bp Feature: domain Description: PRK10276 Location: 2825778-2825892 bp Feature: domain Description: PRK102 76 Location: 2 82 5778-2 82 5892 bp Feature: domain Description: PRK10276 Location: 2825919-2825988 bp Feature: domain Description: PRK102 76 Location: 2 82 5919-2 82 5988 bp Feature: gene Location: 2826089-2826328 bp Feature: gene Location: 2826406-2827890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2826808-2827498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 6808-2 82 7498 bp Feature: gene Location: 2828343-2828552 bp Feature: gene Location: 2828549-2829280 bp Feature: domain Description: Laminin_G_3 Location: 2828870-2829224 bp Feature: domain Description: Laminin_G_3 Location: 2 82 8870-2 82 92 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)