myRT

myRT report for GCA_000567305.1_Kleb_pneu_BIDMC_18A_V2

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Seq: KK036786.1 Klebsiella pneumoniae BIDMC 18A genomic scaffold adjFt-supercont2.5, whole genome shotgun sequence (190663 bp)
Overview 1 RT 1: 187177-190371 bp Neighborhood of RT #1 [187177, 190663] umuC PRK10276 RVT-GII Feature: gene Location: 187177-188448 bp Feature: domain Description: umuC Location: 187180-188443 bp Feature: domain Description: umuC Location: 1 871 80-1 88443 bp Feature: gene Location: 188448-188873 bp Feature: domain Description: PRK10276 Location: 188451-188859 bp Feature: domain Description: PRK1 0276 Location: 1 88451 -1 88859 bp Feature: gene Location: 189279-190663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189681-190371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 89681 -1 90371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KK036783.1 Klebsiella pneumoniae BIDMC 18A genomic scaffold adjFt-supercont2.2, whole genome shotgun sequence (1595794 bp)
Overview 1 RT 1: 175220-180584 bp 2 RT 2: 561698-567309 bp 3 RT 3: 1006475-1009927 bp Neighborhood of RT #1 [175220, 180640] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #2 [561698, 567329] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #3 [1006475, 1009983] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 175220-176485 bp Feature: domain Description: umuC Location: 175223-176483 bp Feature: domain Description: umuC Location: 1752 2 3-176483 bp Feature: gene Location: 176488-176907 bp Feature: domain Description: PRK10276 Location: 176491-176902 bp Feature: domain Description: PRK102 76 Location: 176491-176902 bp Feature: gene Location: 176986-178470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177388-178078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177388-178078 bp Feature: gene Location: 179088-179330 bp Feature: domain Description: DinI Location: 179139-179319 bp Feature: domain Description: DinI Location: 179139-179319 bp Feature: gene Location: 179501-180640 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 179684-180584 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 179684-180584 bp Feature: gene Location: 561698-562633 bp Feature: domain Description: Phage_CI_repr Location: 561782-561965 bp Feature: domain Description: Phage_CI_repr Location: 561782 -561965 bp Feature: domain Description: Phage_CI_repr Location: 562094-562286 bp Feature: domain Description: Phage_CI_repr Location: 562 094-562 2 86 bp Feature: domain Description: Phage_CI_C Location: 562313-562607 bp Feature: domain Description: Phage_CI_C Location: 562 313-562 607 bp Feature: gene Location: 562645-563589 bp Feature: gene Location: 563688-565172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564090-564780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564090-564780 bp Feature: gene Location: 565591-566643 bp Feature: domain Description: int Location: 565594-566593 bp Feature: domain Description: int Location: 565594-566593 bp Feature: gene Location: 566766-567329 bp Feature: domain Description: YbjK Location: 566772-567309 bp Feature: domain Description: YbjK Location: 566772 -567309 bp Feature: gene Location: 1006475-1006792 bp Feature: domain Description: PRK10276 Location: 1006481-1006595 bp Feature: domain Description: PRK102 76 Location: 1006481-1006595 bp Feature: domain Description: PRK10276 Location: 1006622-1006691 bp Feature: domain Description: PRK102 76 Location: 100662 2 -1006691 bp Feature: gene Location: 1006792-1007031 bp Feature: gene Location: 1007109-1008593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007511-1008201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007511-10082 01 bp Feature: gene Location: 1009046-1009255 bp Feature: gene Location: 1009252-1009983 bp Feature: domain Description: Laminin_G_3 Location: 1009573-1009927 bp Feature: domain Description: Laminin_G_3 Location: 1009573-100992 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)

Seq: KK036782.1 Klebsiella pneumoniae BIDMC 18A genomic scaffold adjFt-supercont2.1, whole genome shotgun sequence (1739036 bp)
Overview 1 RT 1: 1126-6991 bp 2 RT 2: 1243103-1249586 bp Neighborhood of RT #1 [1126, 6993] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [1243103, 1249588] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1126-1830 bp Feature: domain Description: Rve Location: 1129-1774 bp Feature: domain Description: Rve Location: 1129-1774 bp Feature: gene Location: 1896-2345 bp Feature: domain Description: PinE Location: 1905-2337 bp Feature: domain Description: PinE Location: 1905-23 3 7 bp Feature: gene Location: 3743-5227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4145-4835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4145-483 5 bp Feature: gene Location: 5220-5726 bp Feature: domain Description: PRK10276 Location: 5310-5721 bp Feature: domain Description: PRK10276 Location: 53 10-5721 bp Feature: gene Location: 5728-6993 bp Feature: domain Description: umuC Location: 5731-6991 bp Feature: domain Description: umuC Location: 573 1-6991 bp Feature: gene Location: 1243103-1244161 bp Feature: domain Description: YccC Location: 1243109-1244147 bp Feature: domain Description: YccC Location: 1243 109-1244147 bp Feature: gene Location: 1244260-1244733 bp Feature: domain Description: PRK10016 Location: 1244263-1244722 bp Feature: domain Description: PRK10016 Location: 1244263 -1244722 bp Feature: gene Location: 1244815-1246299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1245217-1245907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1245217-1245907 bp Feature: gene Location: 1246820-1247983 bp Feature: domain Description: dacD Location: 1246823-1247978 bp Feature: domain Description: dacD Location: 1246823 -1247978 bp Feature: gene Location: 1248164-1249588 bp Feature: domain Description: SbcB Location: 1248170-1249586 bp Feature: domain Description: SbcB Location: 1248170-1249586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)