myRT

myRT report for GCA_000567345.1_Kleb_pneu_BIDMC_13_V1

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Seq: KK036822.1 Klebsiella pneumoniae BIDMC 13 genomic scaffold adjbI-supercont1.4, whole genome shotgun sequence (54276 bp)
Overview 1 RT 1: 8387-12829 bp Neighborhood of RT #1 [8387, 12831] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 8387-9658 bp Feature: domain Description: umuC Location: 8390-9650 bp Feature: domain Description: umuC Location: 8390-9650 bp Feature: gene Location: 9658-10089 bp Feature: domain Description: PRK10276 Location: 9709-10072 bp Feature: domain Description: PRK1 0276 Location: 9709-1 0072 bp Feature: gene Location: 10495-11982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10900-11590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0900-1 1 590 bp Feature: gene Location: 12134-12409 bp Feature: domain Description: InsA Location: 12140-12401 bp Feature: domain Description: InsA Location: 1 21 40-1 2401 bp Feature: gene Location: 12454-12831 bp Feature: domain Description: DDE_Tnp_IS1 Location: 12457-12829 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 2457-1 2829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: KK036799.1 Klebsiella pneumoniae BIDMC 13 genomic scaffold adjbI-supercont1.1, whole genome shotgun sequence (4767307 bp)
Overview 1 RT 1: 2032152-2038623 bp 2 RT 2: 3394266-3399630 bp 3 RT 3: 3737117-3742728 bp 4 RT 4: 4181787-4185239 bp Neighborhood of RT #1 [2032152, 2038637] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3394266, 3399686] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3737117, 3742748] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [4181787, 4185295] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 2032152-2033576 bp Feature: domain Description: SbcB Location: 2032158-2033574 bp Feature: domain Description: SbcB Location: 2 032 158-2 033574 bp Feature: gene Location: 2033757-2034920 bp Feature: domain Description: dacD Location: 2033760-2034915 bp Feature: domain Description: dacD Location: 2 033760-2 034915 bp Feature: gene Location: 2035438-2036925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2035843-2036533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 035843-2 036533 bp Feature: gene Location: 2037007-2037480 bp Feature: domain Description: PRK10016 Location: 2037010-2037469 bp Feature: domain Description: PRK10016 Location: 2 037010-2 037469 bp Feature: gene Location: 2037579-2038637 bp Feature: domain Description: YccC Location: 2037585-2038623 bp Feature: domain Description: YccC Location: 2 037585-2 03862 3 bp Feature: gene Location: 3394266-3395531 bp Feature: domain Description: umuC Location: 3394269-3395529 bp Feature: domain Description: umuC Location: 33942 69-339552 9 bp Feature: gene Location: 3395534-3395953 bp Feature: domain Description: PRK10276 Location: 3395537-3395948 bp Feature: domain Description: PRK102 76 Location: 3395537-3395948 bp Feature: gene Location: 3396032-3397519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3396437-3397127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3396437-339712 7 bp Feature: gene Location: 3398134-3398376 bp Feature: domain Description: DinI Location: 3398185-3398365 bp Feature: domain Description: DinI Location: 3398185-3398365 bp Feature: gene Location: 3398547-3399686 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3398730-3399630 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3398730-3399630 bp Feature: gene Location: 3737117-3738052 bp Feature: domain Description: Phage_CI_repr Location: 3737201-3737384 bp Feature: domain Description: Phage_CI_repr Location: 37372 01-3737384 bp Feature: domain Description: Phage_CI_repr Location: 3737513-3737705 bp Feature: domain Description: Phage_CI_repr Location: 3737513-3737705 bp Feature: domain Description: Phage_CI_C Location: 3737732-3738026 bp Feature: domain Description: Phage_CI_C Location: 3737732 -373802 6 bp Feature: gene Location: 3738064-3739008 bp Feature: gene Location: 3739107-3740594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3739512-3740202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3739512 -37402 02 bp Feature: gene Location: 3741010-3742062 bp Feature: domain Description: int Location: 3741013-3742012 bp Feature: domain Description: int Location: 3741013-3742 012 bp Feature: gene Location: 3742185-3742748 bp Feature: domain Description: YbjK Location: 3742191-3742728 bp Feature: domain Description: YbjK Location: 3742 191-3742 72 8 bp Feature: gene Location: 4181787-4182104 bp Feature: domain Description: PRK10276 Location: 4181793-4181907 bp Feature: domain Description: PRK102 76 Location: 4181793-4181907 bp Feature: domain Description: PRK10276 Location: 4181934-4182003 bp Feature: domain Description: PRK102 76 Location: 4181934-4182 003 bp Feature: gene Location: 4182104-4182343 bp Feature: gene Location: 4182421-4183908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4182826-4183516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4182 82 6-4183516 bp Feature: gene Location: 4184358-4184567 bp Feature: gene Location: 4184564-4185295 bp Feature: domain Description: Laminin_G_3 Location: 4184885-4185239 bp Feature: domain Description: Laminin_G_3 Location: 4184885-41852 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)

Seq: KK036821.1 Klebsiella pneumoniae BIDMC 13 genomic scaffold adjbI-supercont1.3, whole genome shotgun sequence (209038 bp)
Overview 1 RT 1: 81486-86480 bp Neighborhood of RT #1 [81486, 86482] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 81486-82757 bp Feature: domain Description: umuC Location: 81489-82752 bp Feature: domain Description: umuC Location: 81489-82752 bp Feature: gene Location: 82757-83182 bp Feature: domain Description: PRK10276 Location: 82760-83168 bp Feature: domain Description: PRK10276 Location: 82760-83 168 bp Feature: gene Location: 83585-85072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83990-84680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 990-84680 bp Feature: gene Location: 85306-85536 bp Feature: gene Location: 86057-86482 bp Feature: domain Description: Antirestrict Location: 86192-86480 bp Feature: domain Description: Antirestrict Location: 86192-86480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)