myRT

myRT report for GCA_000567365.1_Kleb_pneu_BIDMC_12B_V1

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Seq: KK036831.1 Klebsiella pneumoniae BIDMC 12B genomic scaffold adjbW-supercont1.3, whole genome shotgun sequence (215615 bp)
Overview 1 RT 1: 163861-168855 bp Neighborhood of RT #1 [163861, 168857] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 163861-165132 bp Feature: domain Description: umuC Location: 163864-165127 bp Feature: domain Description: umuC Location: 1 63864-1 651 27 bp Feature: gene Location: 165132-165557 bp Feature: domain Description: PRK10276 Location: 165135-165543 bp Feature: domain Description: PRK1 0276 Location: 1 651 35-1 65543 bp Feature: gene Location: 165960-167447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166365-167055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 66365-1 67055 bp Feature: gene Location: 167681-167911 bp Feature: gene Location: 168432-168857 bp Feature: domain Description: Antirestrict Location: 168567-168855 bp Feature: domain Description: Antirestrict Location: 1 68567-1 68855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KK036828.1 Klebsiella pneumoniae BIDMC 12B genomic scaffold adjbW-supercont1.1, whole genome shotgun sequence (5171042 bp)
Overview 1 RT 1: 331995-335402 bp 2 RT 2: 774795-780400 bp 3 RT 3: 1119605-1125023 bp 4 RT 4: 1297221-1303086 bp 5 RT 5: 2532952-2539435 bp Neighborhood of RT #1 [331995, 335503] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [774795, 780426] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1119605, 1125025] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1297221, 1303088] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2532952, 2539437] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 331995-332726 bp Feature: domain Description: Laminin_G_3 Location: 332316-332670 bp Feature: domain Description: Laminin_G_3 Location: 332 316-332 670 bp Feature: gene Location: 332723-332932 bp Feature: gene Location: 333382-334869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333787-334477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 333787-334477 bp Feature: gene Location: 334947-335186 bp Feature: gene Location: 335186-335503 bp Feature: domain Description: PRK10276 Location: 335192-335306 bp Feature: domain Description: PRK102 76 Location: 335192 -335306 bp Feature: domain Description: PRK10276 Location: 335333-335402 bp Feature: domain Description: PRK102 76 Location: 335333-335402 bp Feature: gene Location: 774795-775358 bp Feature: domain Description: YbjK Location: 774801-775338 bp Feature: domain Description: YbjK Location: 774801-775338 bp Feature: gene Location: 775481-776533 bp Feature: domain Description: int Location: 775484-776483 bp Feature: domain Description: int Location: 775484-776483 bp Feature: gene Location: 776949-778436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777354-778044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777354-778044 bp Feature: gene Location: 778535-779479 bp Feature: gene Location: 779491-780426 bp Feature: domain Description: Phage_CI_repr Location: 779575-779758 bp Feature: domain Description: Phage_CI_repr Location: 779575-779758 bp Feature: domain Description: Phage_CI_repr Location: 779887-780079 bp Feature: domain Description: Phage_CI_repr Location: 779887-780079 bp Feature: domain Description: Phage_CI_C Location: 780106-780400 bp Feature: domain Description: Phage_CI_C Location: 780106-780400 bp Feature: gene Location: 1119605-1120744 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1119788-1120688 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1119788-112 0688 bp Feature: gene Location: 1120915-1121157 bp Feature: domain Description: DinI Location: 1120966-1121146 bp Feature: domain Description: DinI Location: 112 0966-112 1146 bp Feature: gene Location: 1121772-1123259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122177-1122867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 2 177-112 2 867 bp Feature: gene Location: 1123338-1123757 bp Feature: domain Description: PRK10276 Location: 1123341-1123752 bp Feature: domain Description: PRK102 76 Location: 112 3341-112 3752 bp Feature: gene Location: 1123760-1125025 bp Feature: domain Description: umuC Location: 1123763-1125023 bp Feature: domain Description: umuC Location: 112 3763-112 502 3 bp Feature: gene Location: 1297221-1297925 bp Feature: domain Description: Rve Location: 1297224-1297869 bp Feature: domain Description: Rve Location: 12 972 2 4-12 97869 bp Feature: gene Location: 1297991-1298440 bp Feature: domain Description: PinE Location: 1298000-1298432 bp Feature: domain Description: PinE Location: 12 98000-12 98432 bp Feature: gene Location: 1299835-1301322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300240-1300930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13002 40-1300930 bp Feature: gene Location: 1301315-1301821 bp Feature: domain Description: PRK10276 Location: 1301405-1301816 bp Feature: domain Description: PRK102 76 Location: 1301405-1301816 bp Feature: gene Location: 1301823-1303088 bp Feature: domain Description: umuC Location: 1301826-1303086 bp Feature: domain Description: umuC Location: 130182 6-1303086 bp Feature: gene Location: 2532952-2534010 bp Feature: domain Description: YccC Location: 2532958-2533996 bp Feature: domain Description: YccC Location: 2 532 958-2 533996 bp Feature: gene Location: 2534109-2534582 bp Feature: domain Description: PRK10016 Location: 2534112-2534571 bp Feature: domain Description: PRK10016 Location: 2 534112 -2 534571 bp Feature: gene Location: 2534664-2536151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2535069-2535759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 535069-2 535759 bp Feature: gene Location: 2536669-2537832 bp Feature: domain Description: dacD Location: 2536672-2537827 bp Feature: domain Description: dacD Location: 2 536672 -2 53782 7 bp Feature: gene Location: 2538013-2539437 bp Feature: domain Description: SbcB Location: 2538019-2539435 bp Feature: domain Description: SbcB Location: 2 538019-2 539435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)