myRT

myRT report for GCA_000567385.1_Kleb_pneu_BIDMC_12A_V2

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Seq: KK036838.1 Klebsiella pneumoniae BIDMC 12A genomic scaffold adjHg-supercont2.1, whole genome shotgun sequence (5425097 bp)
Overview 1 RT 1: 582155-585562 bp 2 RT 2: 1023495-1029100 bp 3 RT 3: 1367504-1372922 bp 4 RT 4: 1546320-1552185 bp 5 RT 5: 2770986-2777469 bp Neighborhood of RT #1 [582155, 585663] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023495, 1029126] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367504, 1372924] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1546320, 1552187] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2770986, 2777471] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582155-582886 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: gene Location: 582883-583092 bp Feature: gene Location: 583542-585029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: gene Location: 585107-585346 bp Feature: gene Location: 585346-585663 bp Feature: domain Description: PRK10276 Location: 585352-585466 bp Feature: domain Description: PRK1 0276 Location: 585352-585466 bp Feature: domain Description: PRK10276 Location: 585493-585562 bp Feature: domain Description: PRK1 0276 Location: 585493-585562 bp Feature: gene Location: 1023495-1024058 bp Feature: domain Description: YbjK Location: 1023501-1024038 bp Feature: domain Description: YbjK Location: 1 023501 -1 024038 bp Feature: gene Location: 1024181-1025233 bp Feature: domain Description: int Location: 1024184-1025183 bp Feature: domain Description: int Location: 1 0241 84-1 0251 83 bp Feature: gene Location: 1025649-1027136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026054-1026744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 026054-1 026744 bp Feature: gene Location: 1027235-1028179 bp Feature: gene Location: 1028191-1029126 bp Feature: domain Description: Phage_CI_repr Location: 1028275-1028458 bp Feature: domain Description: Phage_CI_repr Location: 1 028275-1 028458 bp Feature: domain Description: Phage_CI_repr Location: 1028587-1028779 bp Feature: domain Description: Phage_CI_repr Location: 1 028587-1 028779 bp Feature: domain Description: Phage_CI_C Location: 1028806-1029100 bp Feature: domain Description: Phage_CI_C Location: 1 028806-1 0291 00 bp Feature: gene Location: 1367504-1368643 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367687-1368587 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 367687-1 368587 bp Feature: gene Location: 1368814-1369056 bp Feature: domain Description: DinI Location: 1368865-1369045 bp Feature: domain Description: DinI Location: 1 368865-1 369045 bp Feature: gene Location: 1369671-1371158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370076-1370766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370076-1 370766 bp Feature: gene Location: 1371237-1371656 bp Feature: domain Description: PRK10276 Location: 1371240-1371651 bp Feature: domain Description: PRK1 0276 Location: 1 371 240-1 371 651 bp Feature: gene Location: 1371659-1372924 bp Feature: domain Description: umuC Location: 1371662-1372922 bp Feature: domain Description: umuC Location: 1 371 662-1 372922 bp Feature: gene Location: 1546320-1547024 bp Feature: domain Description: Rve Location: 1546323-1546968 bp Feature: domain Description: Rve Location: 1 546323-1 546968 bp Feature: gene Location: 1547090-1547539 bp Feature: domain Description: PinE Location: 1547099-1547531 bp Feature: domain Description: PinE Location: 1 547099-1 547531 bp Feature: gene Location: 1548934-1550421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549339-1550029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 549339-1 550029 bp Feature: gene Location: 1550414-1550920 bp Feature: domain Description: PRK10276 Location: 1550504-1550915 bp Feature: domain Description: PRK1 0276 Location: 1 550504-1 55091 5 bp Feature: gene Location: 1550922-1552187 bp Feature: domain Description: umuC Location: 1550925-1552185 bp Feature: domain Description: umuC Location: 1 550925-1 5521 85 bp Feature: gene Location: 2770986-2772044 bp Feature: domain Description: YccC Location: 2770992-2772030 bp Feature: domain Description: YccC Location: 2770992-2772030 bp Feature: gene Location: 2772143-2772616 bp Feature: domain Description: PRK10016 Location: 2772146-2772605 bp Feature: domain Description: PRK1 001 6 Location: 27721 46-2772605 bp Feature: gene Location: 2772698-2774185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2773103-2773793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27731 03-2773793 bp Feature: gene Location: 2774703-2775866 bp Feature: domain Description: dacD Location: 2774706-2775861 bp Feature: domain Description: dacD Location: 2774706-2775861 bp Feature: gene Location: 2776047-2777471 bp Feature: domain Description: SbcB Location: 2776053-2777469 bp Feature: domain Description: SbcB Location: 2776053-2777469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK036841.1 Klebsiella pneumoniae BIDMC 12A genomic scaffold adjHg-supercont2.3, whole genome shotgun sequence (106589 bp)
Overview 1 RT 1: 103129-106323 bp Neighborhood of RT #1 [103129, 106589] umuC PRK10276 RVT-GII Feature: gene Location: 103129-104400 bp Feature: domain Description: umuC Location: 103132-104395 bp Feature: domain Description: umuC Location: 103132 -104395 bp Feature: gene Location: 104400-104825 bp Feature: domain Description: PRK10276 Location: 104403-104811 bp Feature: domain Description: PRK102 76 Location: 104403-104811 bp Feature: gene Location: 105228-106589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105633-106323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105633-10632 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII