myRT

myRT report for GCA_000567405.1_Kleb_pneu_BIDMC_11_V2

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Seq: KK036861.1 Klebsiella pneumoniae BIDMC 11 genomic scaffold adjGJ-supercont2.7, whole genome shotgun sequence (184184 bp)
Overview 1 RT 1: 24093-28839 bp Neighborhood of RT #1 [24093, 28889] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 24093-24518 bp Ori: EWE84343.1 Feature: domain Description: Antirestrict Location: 24228-24516 bp Feature: domain Description: Antirestrict Location: 24228-2451 6 bp Feature: gene Location: 25038-25268 bp Feature: gene Location: 25502-26935 bp Ori: EWE84345.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25829-26543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25829-26543 bp Feature: gene Location: 27415-27840 bp Ori: EWE84346.1 Feature: domain Description: PRK10276 Location: 27418-27826 bp Feature: domain Description: PRK1 0276 Location: 2741 8-27826 bp Feature: gene Location: 27840-28889 bp Ori: EWE84347.1 Feature: domain Description: umuC Location: 27843-28839 bp Feature: domain Description: umuC Location: 27843-28839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK036857.1 Klebsiella pneumoniae BIDMC 11 genomic scaffold adjGJ-supercont2.3, whole genome shotgun sequence (753061 bp)
Overview 1 RT 1: 479021-487639 bp Neighborhood of RT #1 [479021, 487656] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 479021-479734 bp Ori: EWE86918.1 Feature: domain Description: YqgA Location: 479027-479729 bp Feature: domain Description: YqgA Location: 47902 7-47972 9 bp Feature: gene Location: 480552-481415 bp Ori: EWE86919.1 Feature: domain Description: PRK09692 Location: 480576-481413 bp Feature: domain Description: PRK09692 Location: 480576-481413 bp Feature: gene Location: 482173-484254 bp Ori: EWE86920.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 482584-483028 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 482 584-48302 8 bp Feature: gene Location: 484251-486845 bp Ori: EWE86921.1 Feature: domain Description: FimD Location: 484293-486834 bp Feature: domain Description: FimD Location: 4842 93-486834 bp Feature: gene Location: 486892-487656 bp Ori: EWE86922.1 Feature: domain Description: FimC Location: 486937-487639 bp Feature: domain Description: FimC Location: 486937-487639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)