myRT

myRT report for GCA_000567425.1_Kleb_pneu_BIDMC_7B_V2

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Seq: KK036864.1 Klebsiella pneumoniae BIDMC 7B genomic scaffold adjFE-supercont2.1, whole genome shotgun sequence (4587567 bp)
Overview 1 RT 1: 588520-591927 bp 2 RT 2: 1021734-1027339 bp 3 RT 3: 1364325-1369743 bp 4 RT 4: 2720164-2726647 bp Neighborhood of RT #1 [588520, 592028] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1021734, 1027365] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1364325, 1369745] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2720164, 2726649] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 588520-589251 bp Feature: domain Description: Laminin_G_3 Location: 588841-589195 bp Feature: domain Description: Laminin_G_3 Location: 588841 -5891 95 bp Feature: gene Location: 589248-589457 bp Feature: gene Location: 589907-591394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590312-591002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59031 2-591 002 bp Feature: gene Location: 591472-591711 bp Feature: gene Location: 591711-592028 bp Feature: domain Description: PRK10276 Location: 591717-591831 bp Feature: domain Description: PRK1 0276 Location: 591 71 7-591 831 bp Feature: domain Description: PRK10276 Location: 591858-591927 bp Feature: domain Description: PRK1 0276 Location: 591 858-591 927 bp Feature: gene Location: 1021734-1022297 bp Feature: domain Description: YbjK Location: 1021740-1022277 bp Feature: domain Description: YbjK Location: 1 021 740-1 022277 bp Feature: gene Location: 1022420-1023472 bp Feature: domain Description: int Location: 1022423-1023422 bp Feature: domain Description: int Location: 1 022423-1 023422 bp Feature: gene Location: 1023888-1025375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024293-1024983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 024293-1 024983 bp Feature: gene Location: 1025474-1026418 bp Feature: gene Location: 1026430-1027365 bp Feature: domain Description: Phage_CI_repr Location: 1026514-1026697 bp Feature: domain Description: Phage_CI_repr Location: 1 02651 4-1 026697 bp Feature: domain Description: Phage_CI_repr Location: 1026826-1027018 bp Feature: domain Description: Phage_CI_repr Location: 1 026826-1 02701 8 bp Feature: domain Description: Phage_CI_C Location: 1027045-1027339 bp Feature: domain Description: Phage_CI_C Location: 1 027045-1 027339 bp Feature: gene Location: 1364325-1365464 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1364508-1365408 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 364508-1 365408 bp Feature: gene Location: 1365635-1365877 bp Feature: domain Description: DinI Location: 1365686-1365866 bp Feature: domain Description: DinI Location: 1 365686-1 365866 bp Feature: gene Location: 1366492-1367979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1366897-1367587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 366897-1 367587 bp Feature: gene Location: 1368058-1368477 bp Feature: domain Description: PRK10276 Location: 1368061-1368472 bp Feature: domain Description: PRK1 0276 Location: 1 368061 -1 368472 bp Feature: gene Location: 1368480-1369745 bp Feature: domain Description: umuC Location: 1368483-1369743 bp Feature: domain Description: umuC Location: 1 368483-1 369743 bp Feature: gene Location: 2720164-2721222 bp Feature: domain Description: YccC Location: 2720170-2721208 bp Feature: domain Description: YccC Location: 27201 70-2721 208 bp Feature: gene Location: 2721321-2721794 bp Feature: domain Description: PRK10016 Location: 2721324-2721783 bp Feature: domain Description: PRK1 001 6 Location: 2721 324-2721 783 bp Feature: gene Location: 2721876-2723363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2722281-2722971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2722281 -2722971 bp Feature: gene Location: 2723881-2725044 bp Feature: domain Description: dacD Location: 2723884-2725039 bp Feature: domain Description: dacD Location: 2723884-2725039 bp Feature: gene Location: 2725225-2726649 bp Feature: domain Description: SbcB Location: 2725231-2726647 bp Feature: domain Description: SbcB Location: 2725231 -2726647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK036867.1 Klebsiella pneumoniae BIDMC 7B genomic scaffold adjFE-supercont2.4, whole genome shotgun sequence (219017 bp)
Overview 1 RT 1: 27525-32264 bp 2 RT 2: 64834-69171 bp Neighborhood of RT #1 [27525, 32269] Zn_Tnp_IS91 Y2_Tnp RVT-GII PRK10276 umuC Neighborhood of RT #2 [64834, 69179] Zn_Tnp_IS91 Y2_Tnp RVT-GII PRK10276 umuC Feature: gene Location: 27525-27713 bp Feature: gene Location: 27723-28922 bp Feature: domain Description: Zn_Tnp_IS91 Location: 27774-28041 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2 7774-2 8041 bp Feature: domain Description: Y2_Tnp Location: 28155-28689 bp Feature: domain Description: Y2 _Tnp Location: 2 8155-2 8689 bp Feature: gene Location: 29037-30170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29442-30054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9442 -30054 bp Feature: gene Location: 30573-30998 bp Feature: domain Description: PRK10276 Location: 30576-30984 bp Feature: domain Description: PRK102 76 Location: 30576-30984 bp Feature: gene Location: 30998-32269 bp Feature: domain Description: umuC Location: 31001-32264 bp Feature: domain Description: umuC Location: 31001-32 2 64 bp Feature: gene Location: 64834-65022 bp Feature: gene Location: 65032-66231 bp Feature: domain Description: Zn_Tnp_IS91 Location: 65083-65350 bp Feature: domain Description: Zn_Tnp_IS91 Location: 65083-65350 bp Feature: domain Description: Y2_Tnp Location: 65464-65998 bp Feature: domain Description: Y2 _Tnp Location: 65464-65998 bp Feature: gene Location: 66346-67071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66751-67045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66751-67045 bp Feature: gene Location: 67477-67908 bp Feature: domain Description: PRK10276 Location: 67528-67891 bp Feature: domain Description: PRK102 76 Location: 6752 8-67891 bp Feature: gene Location: 67908-69179 bp Feature: domain Description: umuC Location: 67911-69171 bp Feature: domain Description: umuC Location: 67911-69171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)