myRT

myRT report for GCA_000567465.1_Kleb_pneu_BIDMC_4_V2

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Seq: KK036880.1 Klebsiella pneumoniae BIDMC 4 genomic scaffold adjFT-supercont2.3, whole genome shotgun sequence (882004 bp)
Overview 1 RT 1: 670911-677394 bp Neighborhood of RT #1 [670911, 677396] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 670911-671969 bp Feature: domain Description: YccC Location: 670917-671955 bp Feature: domain Description: YccC Location: 67091 7-671 955 bp Feature: gene Location: 672068-672541 bp Feature: domain Description: PRK10016 Location: 672071-672530 bp Feature: domain Description: PRK1 001 6 Location: 672071 -672530 bp Feature: gene Location: 672623-674107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 673025-673715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 673025-67371 5 bp Feature: gene Location: 674628-675791 bp Feature: domain Description: dacD Location: 674631-675786 bp Feature: domain Description: dacD Location: 674631 -675786 bp Feature: gene Location: 675972-677396 bp Feature: domain Description: SbcB Location: 675978-677394 bp Feature: domain Description: SbcB Location: 675978-677394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KK036873.1 Klebsiella pneumoniae BIDMC 4 genomic scaffold adjFT-supercont2.1, whole genome shotgun sequence (2110495 bp)
Overview 1 RT 1: 582499-585906 bp 2 RT 2: 1023846-1029451 bp 3 RT 3: 1420233-1425651 bp Neighborhood of RT #1 [582499, 586007] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023846, 1029477] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1420233, 1425653] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 582499-583230 bp Feature: domain Description: Laminin_G_3 Location: 582820-583174 bp Feature: domain Description: Laminin_G_3 Location: 582 82 0-583174 bp Feature: gene Location: 583227-583436 bp Feature: gene Location: 583889-585373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584291-584981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5842 91-584981 bp Feature: gene Location: 585451-585690 bp Feature: gene Location: 585690-586007 bp Feature: domain Description: PRK10276 Location: 585696-585810 bp Feature: domain Description: PRK102 76 Location: 585696-585810 bp Feature: domain Description: PRK10276 Location: 585837-585906 bp Feature: domain Description: PRK102 76 Location: 585837-585906 bp Feature: gene Location: 1023846-1024409 bp Feature: domain Description: YbjK Location: 1023852-1024389 bp Feature: domain Description: YbjK Location: 102 3852 -102 4389 bp Feature: gene Location: 1024532-1025584 bp Feature: domain Description: int Location: 1024535-1025534 bp Feature: domain Description: int Location: 102 4535-102 5534 bp Feature: gene Location: 1026003-1027487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026405-1027095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 6405-102 7095 bp Feature: gene Location: 1027586-1028530 bp Feature: gene Location: 1028542-1029477 bp Feature: domain Description: Phage_CI_repr Location: 1028626-1028809 bp Feature: domain Description: Phage_CI_repr Location: 102 862 6-102 8809 bp Feature: domain Description: Phage_CI_repr Location: 1028938-1029130 bp Feature: domain Description: Phage_CI_repr Location: 102 8938-102 9130 bp Feature: domain Description: Phage_CI_C Location: 1029157-1029451 bp Feature: domain Description: Phage_CI_C Location: 102 9157-102 9451 bp Feature: gene Location: 1420233-1421372 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1420416-1421316 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 142 0416-142 1316 bp Feature: gene Location: 1421543-1421785 bp Feature: domain Description: DinI Location: 1421594-1421774 bp Feature: domain Description: DinI Location: 142 1594-142 1774 bp Feature: gene Location: 1422403-1423887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1422805-1423495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 2 805-142 3495 bp Feature: gene Location: 1423966-1424385 bp Feature: domain Description: PRK10276 Location: 1423969-1424380 bp Feature: domain Description: PRK102 76 Location: 142 3969-142 4380 bp Feature: gene Location: 1424388-1425653 bp Feature: domain Description: umuC Location: 1424391-1425651 bp Feature: domain Description: umuC Location: 142 4391-142 5651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)