myRT

myRT report for GCA_000567485.1_Kleb_pneu_BIDMC_2A_V2

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Seq: KK036887.1 Klebsiella pneumoniae BIDMC 2A genomic scaffold adjFH-supercont2.1, whole genome shotgun sequence (3257923 bp)
Overview 1 RT 1: 582155-585562 bp 2 RT 2: 1024702-1030307 bp 3 RT 3: 1367218-1372636 bp 4 RT 4: 2740051-2746534 bp Neighborhood of RT #1 [582155, 585663] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024702, 1030333] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367218, 1372638] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2740051, 2746536] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582155-582886 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: domain Description: Laminin_G_3 Location: 582476-582830 bp Feature: gene Location: 582883-583092 bp Feature: gene Location: 583545-585029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583947-584637 bp Feature: gene Location: 585107-585346 bp Feature: gene Location: 585346-585663 bp Feature: domain Description: PRK10276 Location: 585352-585466 bp Feature: domain Description: PRK1 0276 Location: 585352-585466 bp Feature: domain Description: PRK10276 Location: 585493-585562 bp Feature: domain Description: PRK1 0276 Location: 585493-585562 bp Feature: gene Location: 1024702-1025265 bp Feature: domain Description: YbjK Location: 1024708-1025245 bp Feature: domain Description: YbjK Location: 1 024708-1 025245 bp Feature: gene Location: 1025388-1026440 bp Feature: domain Description: int Location: 1025391-1026390 bp Feature: domain Description: int Location: 1 025391 -1 026390 bp Feature: gene Location: 1026859-1028343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027261-1027951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027261 -1 027951 bp Feature: gene Location: 1028442-1029386 bp Feature: gene Location: 1029398-1030333 bp Feature: domain Description: Phage_CI_repr Location: 1029482-1029665 bp Feature: domain Description: Phage_CI_repr Location: 1 029482-1 029665 bp Feature: domain Description: Phage_CI_repr Location: 1029794-1029986 bp Feature: domain Description: Phage_CI_repr Location: 1 029794-1 029986 bp Feature: domain Description: Phage_CI_C Location: 1030013-1030307 bp Feature: domain Description: Phage_CI_C Location: 1 03001 3-1 030307 bp Feature: gene Location: 1367218-1368357 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367401-1368301 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 367401 -1 368301 bp Feature: gene Location: 1368528-1368770 bp Feature: domain Description: DinI Location: 1368579-1368759 bp Feature: domain Description: DinI Location: 1 368579-1 368759 bp Feature: gene Location: 1369388-1370872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369790-1370480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 369790-1 370480 bp Feature: gene Location: 1370951-1371370 bp Feature: domain Description: PRK10276 Location: 1370954-1371365 bp Feature: domain Description: PRK1 0276 Location: 1 370954-1 371 365 bp Feature: gene Location: 1371373-1372638 bp Feature: domain Description: umuC Location: 1371376-1372636 bp Feature: domain Description: umuC Location: 1 371 376-1 372636 bp Feature: gene Location: 2740051-2741109 bp Feature: domain Description: YccC Location: 2740057-2741095 bp Feature: domain Description: YccC Location: 2740057-2741 095 bp Feature: gene Location: 2741208-2741681 bp Feature: domain Description: PRK10016 Location: 2741211-2741670 bp Feature: domain Description: PRK1 001 6 Location: 2741 21 1 -2741 670 bp Feature: gene Location: 2741763-2743247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2742165-2742855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27421 65-2742855 bp Feature: gene Location: 2743768-2744931 bp Feature: domain Description: dacD Location: 2743771-2744926 bp Feature: domain Description: dacD Location: 2743771 -2744926 bp Feature: gene Location: 2745112-2746536 bp Feature: domain Description: SbcB Location: 2745118-2746534 bp Feature: domain Description: SbcB Location: 27451 1 8-2746534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)