myRT

myRT report for GCA_000567525.1_Kleb_pneu_UCI_1_V1

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Seq: KK036902.1 Klebsiella pneumoniae UCICRE 1 genomic scaffold adjbp-supercont1.2, whole genome shotgun sequence (2045851 bp)
Overview 1 RT 1: 582049-585456 bp 2 RT 2: 1023677-1029282 bp 3 RT 3: 1366099-1371517 bp Neighborhood of RT #1 [582049, 585557] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023677, 1029308] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1366099, 1371519] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 582049-582780 bp Feature: domain Description: Laminin_G_3 Location: 582370-582724 bp Feature: domain Description: Laminin_G_3 Location: 582370-582724 bp Feature: gene Location: 582777-582986 bp Feature: gene Location: 583439-584923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583841-584531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583841 -584531 bp Feature: gene Location: 585001-585240 bp Feature: gene Location: 585240-585557 bp Feature: domain Description: PRK10276 Location: 585246-585360 bp Feature: domain Description: PRK1 0276 Location: 585246-585360 bp Feature: domain Description: PRK10276 Location: 585387-585456 bp Feature: domain Description: PRK1 0276 Location: 585387-585456 bp Feature: gene Location: 1023677-1024240 bp Feature: domain Description: YbjK Location: 1023683-1024220 bp Feature: domain Description: YbjK Location: 1 023683-1 024220 bp Feature: gene Location: 1024363-1025415 bp Feature: domain Description: int Location: 1024366-1025365 bp Feature: domain Description: int Location: 1 024366-1 025365 bp Feature: gene Location: 1025834-1027318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026236-1026926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 026236-1 026926 bp Feature: gene Location: 1027417-1028361 bp Feature: gene Location: 1028373-1029308 bp Feature: domain Description: Phage_CI_repr Location: 1028457-1028640 bp Feature: domain Description: Phage_CI_repr Location: 1 028457-1 028640 bp Feature: domain Description: Phage_CI_repr Location: 1028769-1028961 bp Feature: domain Description: Phage_CI_repr Location: 1 028769-1 028961 bp Feature: domain Description: Phage_CI_C Location: 1028988-1029282 bp Feature: domain Description: Phage_CI_C Location: 1 028988-1 029282 bp Feature: gene Location: 1366099-1367238 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1366282-1367182 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 366282-1 3671 82 bp Feature: gene Location: 1367409-1367651 bp Feature: domain Description: DinI Location: 1367460-1367640 bp Feature: domain Description: DinI Location: 1 367460-1 367640 bp Feature: gene Location: 1368269-1369753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368671-1369361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 368671 -1 369361 bp Feature: gene Location: 1369832-1370251 bp Feature: domain Description: PRK10276 Location: 1369835-1370246 bp Feature: domain Description: PRK1 0276 Location: 1 369835-1 370246 bp Feature: gene Location: 1370254-1371519 bp Feature: domain Description: umuC Location: 1370257-1371517 bp Feature: domain Description: umuC Location: 1 370257-1 371 51 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KK036901.1 Klebsiella pneumoniae UCICRE 1 genomic scaffold adjbp-supercont1.1, whole genome shotgun sequence (3275666 bp)
Overview 1 RT 1: 2577968-2584439 bp Neighborhood of RT #1 [2577968, 2584453] SbcB dacD RVT-GII PRK10016 YccC Feature: gene Location: 2577968-2579392 bp Feature: domain Description: SbcB Location: 2577974-2579390 bp Feature: domain Description: SbcB Location: 2 577974-2 579390 bp Feature: gene Location: 2579573-2580736 bp Feature: domain Description: dacD Location: 2579576-2580731 bp Feature: domain Description: dacD Location: 2 579576-2 580731 bp Feature: gene Location: 2581257-2582741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2581659-2582349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 581659-2 582 349 bp Feature: gene Location: 2582823-2583296 bp Feature: domain Description: PRK10016 Location: 2582826-2583285 bp Feature: domain Description: PRK10016 Location: 2 582 82 6-2 5832 85 bp Feature: gene Location: 2583395-2584453 bp Feature: domain Description: YccC Location: 2583401-2584439 bp Feature: domain Description: YccC Location: 2 583401-2 584439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: KK036903.1 Klebsiella pneumoniae UCICRE 1 genomic scaffold adjbp-supercont1.3, whole genome shotgun sequence (192257 bp)
Overview 1 RT 1: 113428-118419 bp Neighborhood of RT #1 [113428, 118424] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 113428-113853 bp Feature: domain Description: Antirestrict Location: 113563-113851 bp Feature: domain Description: Antirestrict Location: 113 563 -113 851 bp Feature: gene Location: 114374-114604 bp Feature: gene Location: 114838-116322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115240-115930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115240-11593 0 bp Feature: gene Location: 116728-117153 bp Feature: domain Description: PRK10276 Location: 116731-117139 bp Feature: domain Description: PRK10276 Location: 11673 1-11713 9 bp Feature: gene Location: 117153-118424 bp Feature: domain Description: umuC Location: 117156-118419 bp Feature: domain Description: umuC Location: 117156-118419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)