myRT

myRT report for GCA_000567545.1_Kleb_pneu_BWH_41_V1

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Seq: KK036908.1 Klebsiella pneumoniae BWH 41 genomic scaffold adjcd-supercont1.1, whole genome shotgun sequence (5421581 bp)
Overview 1 RT 1: 1069539-1072946 bp 2 RT 2: 1513654-1519259 bp 3 RT 3: 1858200-1863618 bp 4 RT 4: 2039009-2044874 bp 5 RT 5: 3280530-3287013 bp Neighborhood of RT #1 [1069539, 1073047] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1513654, 1519285] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1858200, 1863620] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2039009, 2044876] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [3280530, 3287015] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1069539-1070270 bp Feature: domain Description: Laminin_G_3 Location: 1069860-1070214 bp Feature: domain Description: Laminin_G_3 Location: 1 069860-1 07021 4 bp Feature: gene Location: 1070267-1070476 bp Feature: gene Location: 1070926-1072413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1071331-1072021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 071 331 -1 072021 bp Feature: gene Location: 1072491-1072730 bp Feature: gene Location: 1072730-1073047 bp Feature: domain Description: PRK10276 Location: 1072736-1072850 bp Feature: domain Description: PRK1 0276 Location: 1 072736-1 072850 bp Feature: domain Description: PRK10276 Location: 1072877-1072946 bp Feature: domain Description: PRK1 0276 Location: 1 072877-1 072946 bp Feature: gene Location: 1513654-1514217 bp Feature: domain Description: YbjK Location: 1513660-1514197 bp Feature: domain Description: YbjK Location: 1 51 3660-1 51 41 97 bp Feature: gene Location: 1514340-1515392 bp Feature: domain Description: int Location: 1514343-1515342 bp Feature: domain Description: int Location: 1 51 4343-1 51 5342 bp Feature: gene Location: 1515808-1517295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1516213-1516903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 621 3-1 51 6903 bp Feature: gene Location: 1517394-1518338 bp Feature: gene Location: 1518350-1519285 bp Feature: domain Description: Phage_CI_repr Location: 1518434-1518617 bp Feature: domain Description: Phage_CI_repr Location: 1 51 8434-1 51 861 7 bp Feature: domain Description: Phage_CI_repr Location: 1518746-1518938 bp Feature: domain Description: Phage_CI_repr Location: 1 51 8746-1 51 8938 bp Feature: domain Description: Phage_CI_C Location: 1518965-1519259 bp Feature: domain Description: Phage_CI_C Location: 1 51 8965-1 51 9259 bp Feature: gene Location: 1858200-1859339 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1858383-1859283 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 858383-1 859283 bp Feature: gene Location: 1859510-1859752 bp Feature: domain Description: DinI Location: 1859561-1859741 bp Feature: domain Description: DinI Location: 1 859561 -1 859741 bp Feature: gene Location: 1860367-1861854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1860772-1861462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 860772-1 861 462 bp Feature: gene Location: 1861933-1862352 bp Feature: domain Description: PRK10276 Location: 1861936-1862347 bp Feature: domain Description: PRK1 0276 Location: 1 861 936-1 862347 bp Feature: gene Location: 1862355-1863620 bp Feature: domain Description: umuC Location: 1862358-1863618 bp Feature: domain Description: umuC Location: 1 862358-1 86361 8 bp Feature: gene Location: 2039009-2039713 bp Feature: domain Description: Rve Location: 2039012-2039657 bp Feature: domain Description: Rve Location: 203901 2-2039657 bp Feature: gene Location: 2039779-2040228 bp Feature: domain Description: PinE Location: 2039788-2040220 bp Feature: domain Description: PinE Location: 2039788-2040220 bp Feature: gene Location: 2041623-2043110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042028-2042718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2042028-204271 8 bp Feature: gene Location: 2043103-2043609 bp Feature: domain Description: PRK10276 Location: 2043193-2043604 bp Feature: domain Description: PRK1 0276 Location: 20431 93-2043604 bp Feature: gene Location: 2043611-2044876 bp Feature: domain Description: umuC Location: 2043614-2044874 bp Feature: domain Description: umuC Location: 204361 4-2044874 bp Feature: gene Location: 3280530-3281588 bp Feature: domain Description: YccC Location: 3280536-3281574 bp Feature: domain Description: YccC Location: 3280536-3281 574 bp Feature: gene Location: 3281687-3282160 bp Feature: domain Description: PRK10016 Location: 3281690-3282149 bp Feature: domain Description: PRK1 001 6 Location: 3281 690-32821 49 bp Feature: gene Location: 3282242-3283729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282647-3283337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3282647-3283337 bp Feature: gene Location: 3284247-3285410 bp Feature: domain Description: dacD Location: 3284250-3285405 bp Feature: domain Description: dacD Location: 3284250-3285405 bp Feature: gene Location: 3285591-3287015 bp Feature: domain Description: SbcB Location: 3285597-3287013 bp Feature: domain Description: SbcB Location: 3285597-328701 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK036909.1 Klebsiella pneumoniae BWH 41 genomic scaffold adjcd-supercont1.2, whole genome shotgun sequence (198966 bp)
Overview 1 RT 1: 57255-62246 bp Neighborhood of RT #1 [57255, 62251] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 57255-57680 bp Feature: domain Description: Antirestrict Location: 57390-57678 bp Feature: domain Description: Antirestrict Location: 57390-57678 bp Feature: gene Location: 58201-58431 bp Feature: gene Location: 58665-60152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59070-59760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59070-59760 bp Feature: gene Location: 60555-60980 bp Feature: domain Description: PRK10276 Location: 60558-60966 bp Feature: domain Description: PRK102 76 Location: 60558-60966 bp Feature: gene Location: 60980-62251 bp Feature: domain Description: umuC Location: 60983-62246 bp Feature: domain Description: umuC Location: 60983-62 2 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)