myRT

myRT report for GCA_000567565.1_Kleb_pneu_BWH_36_V1

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Seq: KK036911.1 Klebsiella pneumoniae BWH 36 genomic scaffold adjcv-supercont1.1, whole genome shotgun sequence (5318191 bp)
Overview 1 RT 1: 1149212-1155695 bp 2 RT 2: 4344413-4347820 bp 3 RT 3: 4777505-4790785 bp 4 RT 4: 5121971-5127389 bp Neighborhood of RT #1 [1149212, 1155697] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [4344413, 4347921] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #3 [4777505, 4790790] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [5121971, 5127391] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 1149212-1150270 bp Feature: domain Description: YccC Location: 1149218-1150256 bp Feature: domain Description: YccC Location: 1 1 4921 8-1 1 50256 bp Feature: gene Location: 1150369-1150842 bp Feature: domain Description: PRK10016 Location: 1150372-1150831 bp Feature: domain Description: PRK1 001 6 Location: 1 1 50372-1 1 50831 bp Feature: gene Location: 1150924-1152411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151329-1152019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 329-1 1 5201 9 bp Feature: gene Location: 1152929-1154092 bp Feature: domain Description: dacD Location: 1152932-1154087 bp Feature: domain Description: dacD Location: 1 1 52932-1 1 54087 bp Feature: gene Location: 1154273-1155697 bp Feature: domain Description: SbcB Location: 1154279-1155695 bp Feature: domain Description: SbcB Location: 1 1 54279-1 1 55695 bp Feature: gene Location: 4344413-4345144 bp Feature: domain Description: Laminin_G_3 Location: 4344734-4345088 bp Feature: domain Description: Laminin_G_3 Location: 4344734-4345088 bp Feature: gene Location: 4345141-4345350 bp Feature: gene Location: 4345800-4347287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4346205-4346895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4346205-4346895 bp Feature: gene Location: 4347365-4347604 bp Feature: gene Location: 4347604-4347921 bp Feature: domain Description: PRK10276 Location: 4347610-4347724 bp Feature: domain Description: PRK1 0276 Location: 434761 0-4347724 bp Feature: domain Description: PRK10276 Location: 4347751-4347820 bp Feature: domain Description: PRK1 0276 Location: 4347751 -4347820 bp Feature: gene Location: 4777505-4778068 bp Feature: domain Description: YbjK Location: 4777511-4778048 bp Feature: domain Description: YbjK Location: 477751 1 -4778048 bp Feature: gene Location: 4778191-4779243 bp Feature: domain Description: int Location: 4778194-4779193 bp Feature: domain Description: int Location: 47781 94-47791 93 bp Feature: gene Location: 4779659-4781146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4780064-4780754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4780064-4780754 bp Feature: gene Location: 4781245-4782189 bp Feature: gene Location: 4782201-4783136 bp Feature: domain Description: Phage_CI_repr Location: 4782285-4782468 bp Feature: domain Description: Phage_CI_repr Location: 4782285-4782468 bp Feature: domain Description: Phage_CI_repr Location: 4782597-4782789 bp Feature: domain Description: Phage_CI_repr Location: 4782597-4782789 bp Feature: domain Description: Phage_CI_C Location: 4782816-4783110 bp Feature: domain Description: Phage_CI_C Location: 478281 6-47831 1 0 bp Feature: gene Location: 4785026-4785883 bp Feature: domain Description: dam Location: 4785029-4785806 bp Feature: domain Description: dam Location: 4785029-4785806 bp Feature: gene Location: 4785880-4788294 bp Feature: domain Description: Phage_GPA Location: 4786444-4787410 bp Feature: domain Description: Phage_GPA Location: 4786444-478741 0 bp Feature: gene Location: 4788770-4790257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4789175-4789865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47891 75-4789865 bp Feature: gene Location: 4790358-4790546 bp Feature: gene Location: 4790557-4790790 bp Feature: domain Description: DinI Location: 4790599-4790785 bp Feature: domain Description: DinI Location: 4790599-4790785 bp Feature: gene Location: 5121971-5123110 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 5122154-5123054 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 51 221 54-51 23054 bp Feature: gene Location: 5123281-5123523 bp Feature: domain Description: DinI Location: 5123332-5123512 bp Feature: domain Description: DinI Location: 51 23332-51 2351 2 bp Feature: gene Location: 5124138-5125625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5124543-5125233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 24543-51 25233 bp Feature: gene Location: 5125704-5126123 bp Feature: domain Description: PRK10276 Location: 5125707-5126118 bp Feature: domain Description: PRK1 0276 Location: 51 25707-51 261 1 8 bp Feature: gene Location: 5126126-5127391 bp Feature: domain Description: umuC Location: 5126129-5127389 bp Feature: domain Description: umuC Location: 51 261 29-51 27389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), Laminin_G_3 (pfam13385), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609)

Seq: KK036913.1 Klebsiella pneumoniae BWH 36 genomic scaffold adjcv-supercont1.2, whole genome shotgun sequence (101376 bp)
Overview 1 RT 1: 87369-91714 bp Neighborhood of RT #1 [87369, 91714] umuC PRK10276 RVT-GII Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 87369-88640 bp Feature: domain Description: umuC Location: 87372-88632 bp Feature: domain Description: umuC Location: 87372 -88632 bp Feature: gene Location: 88640-89071 bp Feature: domain Description: PRK10276 Location: 88691-89054 bp Feature: domain Description: PRK102 76 Location: 88691-89054 bp Feature: gene Location: 89477-90202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89882-90176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89882 -90176 bp Feature: gene Location: 90317-91516 bp Feature: domain Description: Zn_Tnp_IS91 Location: 90368-90635 bp Feature: domain Description: Zn_Tnp_IS91 Location: 90368-90635 bp Feature: domain Description: Y2_Tnp Location: 90749-91283 bp Feature: domain Description: Y2 _Tnp Location: 90749-912 83 bp Feature: gene Location: 91526-91714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)