myRT

myRT report for GCA_000567585.1_Kleb_pneu_BWH_22_V2

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Seq: KK036922.1 Klebsiella pneumoniae BWH 22 genomic scaffold adjFL-supercont2.2, whole genome shotgun sequence (177990 bp)
Overview 1 RT 1: 168721-173715 bp Neighborhood of RT #1 [168721, 173717] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 168721-169992 bp Feature: domain Description: umuC Location: 168724-169987 bp Feature: domain Description: umuC Location: 1 68724-1 69987 bp Feature: gene Location: 169992-170417 bp Feature: domain Description: PRK10276 Location: 169995-170403 bp Feature: domain Description: PRK1 0276 Location: 1 69995-1 70403 bp Feature: gene Location: 170823-172307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 171225-171915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 225-1 71 91 5 bp Feature: gene Location: 172541-172771 bp Feature: gene Location: 173292-173717 bp Feature: domain Description: Antirestrict Location: 173427-173715 bp Feature: domain Description: Antirestrict Location: 1 73427-1 7371 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KK036923.1 Klebsiella pneumoniae BWH 22 genomic scaffold adjFL-supercont2.3, whole genome shotgun sequence (74675 bp)
Overview 1 RT 1: 24198-28640 bp Neighborhood of RT #1 [24198, 28642] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 24198-25469 bp Feature: domain Description: umuC Location: 24201-25461 bp Feature: domain Description: umuC Location: 2 42 01-2 5461 bp Feature: gene Location: 25469-25900 bp Feature: domain Description: PRK10276 Location: 25520-25883 bp Feature: domain Description: PRK102 76 Location: 2 552 0-2 5883 bp Feature: gene Location: 26309-27793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26711-27401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6711-2 7401 bp Feature: gene Location: 27945-28220 bp Feature: domain Description: InsA Location: 27951-28212 bp Feature: domain Description: InsA Location: 2 7951-2 82 12 bp Feature: gene Location: 28265-28642 bp Feature: domain Description: DDE_Tnp_IS1 Location: 28268-28640 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 82 68-2 8640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: KK036921.1 Klebsiella pneumoniae BWH 22 genomic scaffold adjFL-supercont2.1, whole genome shotgun sequence (5293122 bp)
Overview 1 RT 1: 582606-586013 bp 2 RT 2: 1025339-1030944 bp 3 RT 3: 1367883-1373301 bp 4 RT 4: 2688412-2694895 bp Neighborhood of RT #1 [582606, 586114] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025339, 1030970] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367883, 1373303] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2688412, 2694897] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582606-583337 bp Feature: domain Description: Laminin_G_3 Location: 582927-583281 bp Feature: domain Description: Laminin_G_3 Location: 582927-583 281 bp Feature: gene Location: 583334-583543 bp Feature: gene Location: 583996-585480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584398-585088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5843 98-585088 bp Feature: gene Location: 585558-585797 bp Feature: gene Location: 585797-586114 bp Feature: domain Description: PRK10276 Location: 585803-585917 bp Feature: domain Description: PRK10276 Location: 585803 -585917 bp Feature: domain Description: PRK10276 Location: 585944-586013 bp Feature: domain Description: PRK10276 Location: 585944-586013 bp Feature: gene Location: 1025339-1025902 bp Feature: domain Description: YbjK Location: 1025345-1025882 bp Feature: domain Description: YbjK Location: 10253 45-1025882 bp Feature: gene Location: 1026025-1027077 bp Feature: domain Description: int Location: 1026028-1027027 bp Feature: domain Description: int Location: 1026028-1027027 bp Feature: gene Location: 1027496-1028980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027898-1028588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027898-1028588 bp Feature: gene Location: 1029079-1030023 bp Feature: gene Location: 1030035-1030970 bp Feature: domain Description: Phage_CI_repr Location: 1030119-1030302 bp Feature: domain Description: Phage_CI_repr Location: 103 0119-103 03 02 bp Feature: domain Description: Phage_CI_repr Location: 1030431-1030623 bp Feature: domain Description: Phage_CI_repr Location: 103 043 1-103 0623 bp Feature: domain Description: Phage_CI_C Location: 1030650-1030944 bp Feature: domain Description: Phage_CI_C Location: 103 0650-103 0944 bp Feature: gene Location: 1367883-1369022 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368066-1368966 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 68066-13 68966 bp Feature: gene Location: 1369193-1369435 bp Feature: domain Description: DinI Location: 1369244-1369424 bp Feature: domain Description: DinI Location: 13 69244-13 69424 bp Feature: gene Location: 1370053-1371537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370455-1371145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 70455-13 71145 bp Feature: gene Location: 1371616-1372035 bp Feature: domain Description: PRK10276 Location: 1371619-1372030 bp Feature: domain Description: PRK10276 Location: 13 71619-13 7203 0 bp Feature: gene Location: 1372038-1373303 bp Feature: domain Description: umuC Location: 1372041-1373301 bp Feature: domain Description: umuC Location: 13 72041-13 73 3 01 bp Feature: gene Location: 2688412-2689470 bp Feature: domain Description: YccC Location: 2688418-2689456 bp Feature: domain Description: YccC Location: 2688418-2689456 bp Feature: gene Location: 2689569-2690042 bp Feature: domain Description: PRK10016 Location: 2689572-2690031 bp Feature: domain Description: PRK10016 Location: 2689572-269003 1 bp Feature: gene Location: 2690124-2691608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2690526-2691216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2690526-2691216 bp Feature: gene Location: 2692129-2693292 bp Feature: domain Description: dacD Location: 2692132-2693287 bp Feature: domain Description: dacD Location: 269213 2-2693 287 bp Feature: gene Location: 2693473-2694897 bp Feature: domain Description: SbcB Location: 2693479-2694895 bp Feature: domain Description: SbcB Location: 2693 479-2694895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)