myRT

myRT report for GCA_000567625.1_Kleb_pneu_BWH_2_V2

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Seq: KK036936.1 Klebsiella pneumoniae BWH 2 genomic scaffold adjFy-supercont2.1, whole genome shotgun sequence (5401364 bp)
Overview 1 RT 1: 1995417-1998491 bp 2 RT 2: 2661069-2668686 bp Neighborhood of RT #1 [1995417, 1998496] PRK09678 RVT-UG11 SmpB PRK10724 Neighborhood of RT #2 [2661069, 2668721] Nuc_deoxyrib_tr RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 1995417-1995635 bp Ori: EWF44895.1 Feature: domain Description: PRK09678 Location: 1995420-1995618 bp Feature: domain Description: PRK09678 Location: 1 995420-1 99561 8 bp Feature: gene Location: 1995897-1996070 bp Feature: gene Location: 1996039-1996812 bp Ori: EWF44897.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1996174-1996627 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 9961 74-1 996627 bp Feature: gene Location: 1997427-1997909 bp Ori: EWF44898.1 Feature: domain Description: SmpB Location: 1997457-1997901 bp Feature: domain Description: SmpB Location: 1 997457-1 997901 bp Feature: gene Location: 1998059-1998496 bp Ori: EWF44899.1 Feature: domain Description: PRK10724 Location: 1998062-1998491 bp Feature: domain Description: PRK1 0724 Location: 1 998062-1 998491 bp Feature: gene Location: 2661069-2661320 bp Feature: gene Location: 2661317-2662186 bp Ori: EWF43559.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 2661839-2662010 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2661 839-266201 0 bp Feature: gene Location: 2662842-2663942 bp Ori: EWF43560.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2663022-2663556 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2663022-2663556 bp Feature: gene Location: 2664057-2666303 bp Ori: EWF43561.1 Feature: domain Description: AAA_15 Location: 2664060-2665068 bp Feature: domain Description: AAA_1 5 Location: 2664060-2665068 bp Feature: gene Location: 2667702-2668721 bp Ori: EWF43562.1 Feature: domain Description: DUF4917 Location: 2667762-2668686 bp Feature: domain Description: DUF491 7 Location: 2667762-2668686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)

Seq: KK036937.1 Klebsiella pneumoniae BWH 2 genomic scaffold adjFy-supercont2.2, whole genome shotgun sequence (70512 bp)
Overview 1 RT 1: 28517-33538 bp Neighborhood of RT #1 [28517, 33651] InsE PHA02517 RVT-GII GIIM COG3547 Phage_integrase Feature: gene Location: 28517-28819 bp Ori: EWF37704.1 Feature: domain Description: InsE Location: 28526-28808 bp Feature: domain Description: InsE Location: 2 852 6-2 8808 bp Feature: gene Location: 29032-29271 bp Ori: EWF37705.1 Feature: domain Description: PHA02517 Location: 29035-29206 bp Feature: domain Description: PHA02 517 Location: 2 9035-2 92 06 bp Feature: gene Location: 29863-31386 bp Ori: EWF37706.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30136-30868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30136-30868 bp Feature: domain Description: GIIM Note: maturase Location: 30943-31141 bp Feature: domain Description: GIIM Note: maturase Location: 30943-31141 bp Feature: gene Location: 31928-33004 bp Ori: EWF37707.1 Feature: domain Description: COG3547 Location: 31967-32888 bp Feature: domain Description: COG3547 Location: 31967-32 888 bp Feature: gene Location: 33304-33651 bp Ori: EWF37708.1 Feature: domain Description: Phage_integrase Location: 33310-33538 bp Feature: domain Description: Phage_integrase Location: 33310-33538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), Phage_integrase (pfam00589)

Seq: KK036939.1 Klebsiella pneumoniae BWH 2 genomic scaffold adjFy-supercont2.4, whole genome shotgun sequence (38788 bp)
Overview 1 RT 1: 6865-12798 bp Neighborhood of RT #1 [6865, 12806] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 6865-7296 bp Feature: gene Location: 7776-8741 bp Ori: EWF37048.1 Feature: domain Description: ArdC Location: 7902-8736 bp Feature: domain Description: ArdC Location: 7902-873 6 bp Feature: gene Location: 9211-10695 bp Ori: EWF37049.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9613-10303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9613 -103 03 bp Feature: gene Location: 11104-11535 bp Ori: EWF37050.1 Feature: domain Description: PRK10276 Location: 11155-11518 bp Feature: domain Description: PRK10276 Location: 11155-11518 bp Feature: gene Location: 11535-12806 bp Ori: EWF37051.1 Feature: domain Description: umuC Location: 11538-12798 bp Feature: domain Description: umuC Location: 1153 8-12798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)