myRT

myRT report for GCA_000567665.1_Kleb_pneu_MGH_45_V1

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Seq: KK036952.1 Klebsiella pneumoniae MGH 45 genomic scaffold adjbE-supercont1.4, whole genome shotgun sequence (133981 bp)
Overview 1 RT 1: 5675-10117 bp Neighborhood of RT #1 [5675, 10119] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 5675-6946 bp Feature: domain Description: umuC Location: 5678-6938 bp Feature: domain Description: umuC Location: 5678-6938 bp Feature: gene Location: 6946-7377 bp Feature: domain Description: PRK10276 Location: 6997-7360 bp Feature: domain Description: PRK1 0276 Location: 6997-7360 bp Feature: gene Location: 7786-9270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8188-8878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 88-8878 bp Feature: gene Location: 9422-9697 bp Feature: domain Description: InsA Location: 9428-9689 bp Feature: domain Description: InsA Location: 9428-9689 bp Feature: gene Location: 9742-10119 bp Feature: domain Description: DDE_Tnp_IS1 Location: 9745-10117 bp Feature: domain Description: DDE_Tnp_IS1 Location: 9745-1 01 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: KK036949.1 Klebsiella pneumoniae MGH 45 genomic scaffold adjbE-supercont1.1, whole genome shotgun sequence (5026345 bp)
Overview 1 RT 1: 327214-330621 bp 2 RT 2: 767547-773152 bp 3 RT 3: 1109881-1115299 bp 4 RT 4: 2429694-2436177 bp Neighborhood of RT #1 [327214, 330722] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [767547, 773178] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1109881, 1115301] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2429694, 2436179] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 327214-327945 bp Feature: domain Description: Laminin_G_3 Location: 327535-327889 bp Feature: domain Description: Laminin_G_3 Location: 32 7535-32 7889 bp Feature: gene Location: 327942-328151 bp Feature: gene Location: 328604-330088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329006-329696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 9006-32 9696 bp Feature: gene Location: 330166-330405 bp Feature: gene Location: 330405-330722 bp Feature: domain Description: PRK10276 Location: 330411-330525 bp Feature: domain Description: PRK102 76 Location: 330411-33052 5 bp Feature: domain Description: PRK10276 Location: 330552-330621 bp Feature: domain Description: PRK102 76 Location: 330552 -33062 1 bp Feature: gene Location: 767547-768110 bp Feature: domain Description: YbjK Location: 767553-768090 bp Feature: domain Description: YbjK Location: 767553-768090 bp Feature: gene Location: 768233-769285 bp Feature: domain Description: int Location: 768236-769235 bp Feature: domain Description: int Location: 7682 36-7692 35 bp Feature: gene Location: 769704-771188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770106-770796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 770106-770796 bp Feature: gene Location: 771287-772231 bp Feature: gene Location: 772243-773178 bp Feature: domain Description: Phage_CI_repr Location: 772327-772510 bp Feature: domain Description: Phage_CI_repr Location: 772 32 7-772 510 bp Feature: domain Description: Phage_CI_repr Location: 772639-772831 bp Feature: domain Description: Phage_CI_repr Location: 772 639-772 831 bp Feature: domain Description: Phage_CI_C Location: 772858-773152 bp Feature: domain Description: Phage_CI_C Location: 772 858-773152 bp Feature: gene Location: 1109881-1111020 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1110064-1110964 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1110064-1110964 bp Feature: gene Location: 1111191-1111433 bp Feature: domain Description: DinI Location: 1111242-1111422 bp Feature: domain Description: DinI Location: 11112 42 -111142 2 bp Feature: gene Location: 1112051-1113535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1112453-1113143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1112 453-1113143 bp Feature: gene Location: 1113614-1114033 bp Feature: domain Description: PRK10276 Location: 1113617-1114028 bp Feature: domain Description: PRK102 76 Location: 1113617-111402 8 bp Feature: gene Location: 1114036-1115301 bp Feature: domain Description: umuC Location: 1114039-1115299 bp Feature: domain Description: umuC Location: 1114039-11152 99 bp Feature: gene Location: 2429694-2430752 bp Feature: domain Description: YccC Location: 2429700-2430738 bp Feature: domain Description: YccC Location: 2 42 9700-2 430738 bp Feature: gene Location: 2430851-2431324 bp Feature: domain Description: PRK10016 Location: 2430854-2431313 bp Feature: domain Description: PRK10016 Location: 2 430854-2 431313 bp Feature: gene Location: 2431406-2432890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2431808-2432498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 431808-2 432 498 bp Feature: gene Location: 2433411-2434574 bp Feature: domain Description: dacD Location: 2433414-2434569 bp Feature: domain Description: dacD Location: 2 433414-2 434569 bp Feature: gene Location: 2434755-2436179 bp Feature: domain Description: SbcB Location: 2434761-2436177 bp Feature: domain Description: SbcB Location: 2 434761-2 436177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KK036951.1 Klebsiella pneumoniae MGH 45 genomic scaffold adjbE-supercont1.3, whole genome shotgun sequence (179181 bp)
Overview 1 RT 1: 160720-165714 bp Neighborhood of RT #1 [160720, 165716] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 160720-161991 bp Feature: domain Description: umuC Location: 160723-161986 bp Feature: domain Description: umuC Location: 160723 -161986 bp Feature: gene Location: 161991-162416 bp Feature: domain Description: PRK10276 Location: 161994-162402 bp Feature: domain Description: PRK10276 Location: 161994-162402 bp Feature: gene Location: 162822-164306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163224-163914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163 224-163 914 bp Feature: gene Location: 164540-164770 bp Feature: gene Location: 165291-165716 bp Feature: domain Description: Antirestrict Location: 165426-165714 bp Feature: domain Description: Antirestrict Location: 165426-165714 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)